Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq174 158 4e-34 >seq174 Length=42168 Score = 158 bits (174), Expect = 4e-34 Identities = 315/461 (68%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15979 CAGAGGTCATTGACGCCAAACTGCGTTATCCAAATACCGCGCTGCTGTACATCGAATTCG 16038 |||||||||| ||| ||||||||| || || ||||||||||||||||| ||||| | | Sbjct 7187 CAGAGGTCATCGACAGCAAACTGCGCTACCCCAATACCGCGCTGCTGTATATCGAGGTTG 7128 Query 16039 ACTCAAGCCAGTTTAACGGCTCTATCCCGCAAA-TATCCTGCGAACCGCGAGGGCGTGTT 16097 | | || ||||| | ||| || | | ||| || | ||| | || |||||| | Sbjct 7127 ATGCCAGTCAGTTCAGCGG-TCAGGCACCAAAAGTAACGTGCAAGCCAAAAGGGCGGCTG 7069 Query 16098 ATCCGCGTACCGGATACTTACGACCCAGAAACCCGCACTTATAACGGCACCTGGCTGGGG 16157 | ||||| ||| || || || || | | || | |||| ||| || |||| ||| Sbjct 7068 GTTCGCGTGCCGACAACCTATGATCCTGTTTCACGTAGTTATGCCGGAACGTGGCAGGGT 7009 Query 16158 ACGTTTAAATGGGCATGGACTGATAATCCGGCCTGGATTTTTTACGATCTGGTGGTGAGT 16217 || |||| || | || ||||| ||||| |||||||| || || |||||| || | Sbjct 7008 GATTTCAAATACGCCTATACCGATAACCCGGCATGGATTTTCTATGACCTGGTGCTGGAT 6949 Query 16218 GACCGCTTTGGCCTTGGCGACCGCCTGACG--GCAGCAAATATTGATAAATGGACGCTTT 16275 | ||||| | || ||| || || || || | | || || || ||| ||||| Sbjct 6948 AAAATATTTGGTATGGG-GAC-GCGTGTCGATGCCACCATGATCGACAAGTGGGAGCTTT 6891 Query 16276 ACCAGGTTGCACAATATTGCGATCAGCCGGTACCAGACGGAAAAGGCGGTTCCGGCACCG 16335 || || | || || ||||||||| ||| | ||||| |||||| || | Sbjct 6890 ACAGTATTTCGCAGTACTGCGATCAGATGGTGTCTGACGGCGCAGGCGGA------ACGG 6837 Query 16336 AGCCTCGCTATACCTGTAACGTGTATGTGCAGGAGAGGAATGACGCTTATACCGTTTTGC 16395 |||| |||| |||||||||||||| | ||| | | || || ||||||||| || Sbjct 6836 AGCCGCGCTTTACCTGTAACGTGTTCATACAGAGTCAGCAGGATGCGTATACCGTTCTGA 6777 Query 16396 GTGATTTTGCGGCCATATTCCGTGGCATGACGTACTGGGGC 16436 || ||||||| |||||||||||||| |||| ||||||| Sbjct 6776 AGGACATTGCGGCGATATTCCGTGGCATTACGTTCTGGGGC 6736 Score = 80.6 bits (88), Expect = 8e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 12509 GGTGGCGGTTATACCGGTTCAGGCGGGAAATATGAACCTGCAGGTGTCGTTCACCGTGGT 12568 ||||| || | |||||| | |||||||||||||| || ||||| | || || || Sbjct 11216 GGTGGTGGCTTCACCGGTGCGGGCGGGAAATATGATCCGGCAGGCATTGTGCATAAAGGG 11157 Query 12569 GAATTTGTTTTCACCAAAGAGGCTACAAACCGGATCGGCGTCGGCAATCTTTACCGGATG 12628 ||||| || |||||||||||||| ||| |||| || || || || || || || Sbjct 11156 GAATTCGTCTTCACCAAAGAGGCAACAGACCGTATAGGTGTGTCAAACCTCTATTCACTG 11097 Query 12629 ATGAAAGGGTATGC 12642 |||||||| ||||| Sbjct 11096 ATGAAAGGCTATGC 11083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148267185426586