Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq1 352 8e-93 seq9 105 2e-18 >seq1 Length=970878 Score = 352 bits (390), Expect = 8e-93 Identities = 665/973 (68%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 19755 AGGCCGCTGTTTGGTTTCTATGTAAATTCTACCAATATATTCTCCAAGAATACCTATTCC 19814 ||| || | ||||||||| |||||||| | || |||||||| || || | || || || Sbjct 786016 AGGACGATTTTTGGTTTCCATGTAAATGCGGCCGATATATTCACCCAGCACGCCAATCCC 786075 Query 19815 TATCAATTGAACGCCACCCAGGAAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAAC 19874 || | ||||||||||| || || || || ||||| |||| ||| |||||||| || || Sbjct 786076 AATAAGCTGAACGCCACCAAGAAACAGCACGGAAACCAGAATAGAGGGGTAGCCTGGCAC 786135 Query 19875 ATTATTTCCAAATATTAATTTATCAATAATCATCCATGCACCGTAAAGGAATGACATACC 19934 || ||||| | || ||||| | |||||||| || || || || | | Sbjct 786136 CGGGTTACCAAACAGCAACTTATCCAGGATCATCCAGAGTCCATATAGAAAAGCTAGCGA 786195 Query 19935 TGCAATAAACAATCCAATGTAAGTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTAT 19994 || | | || || | || | ||| ||||| || |||| || ||||| || || | Sbjct 786196 GGCCACCAGAAAACCCAGATATGACCAGATGCGAAGTGGAACCGTAGAGAATGAGGTCAG 786255 Query 19995 TCCCTCCAGCGCCAGGTTCCATAATTTCCAGCCGTTGAATTTCGAATCACCGGCCACGCG 20054 |||||||||||| || ||||| | ||||||||| |||||| | || || | || Sbjct 786256 TCCCTCCAGCGCAAGATTCCACAGCTTCCAGCCGCCGAATTTACTGTGGCCCGCGATCCG 786315 Query 20055 TTCGGCACGGGCATATTTAACAACATCCGTTTTTCCGCCAACCCAACTGAGCACACCCTT 20114 || | ||| |||||| || | ||| || |||||||| |||||||| || | ||||| Sbjct 786316 CTCAGTACGCACATATTCTACGATATCAGTCTTTCCGCCGACCCAACTCAGAATCCCCTT 786375 Query 20115 CATAAACAAGTTGCGTTCTGGCATTTGTTTGATGTTCTCGACAACCGCACGGCTCATTAA 20174 |||||| | || || |||| | || || ||||||||||| |||| ||| | Sbjct 786376 CATAAAGAGATTCTTCTCGGGCAGCAGCTTAATATTCTCGACAACTTCACGCGACATCAG 786435 Query 20175 CCGAAAGTCGCCAACATTTTCTTCGATTTTTGGATTGCTGATTTTATTGTGCAGCTTATA 20234 ||| || || || ||||| ||||| || | |||| |||||| | || ||||| || || Sbjct 786436 CCGGAAATCACCGACATTCTCTTCTATCTGCGGATGGCTGATGCTGTTATGCAGTTTGTA 786495 Query 20235 AAACCACTCAGCTGTCTTACGCTTCATGCGCCCGTCAGTTGAGCGGTCTGAGCGCTTAGC 20294 |||||| || || || || || | | | || || | | ||| ||||| || Sbjct 786496 AAACCAGCGGGCGGTTTTGCGTTTGAGGTGGCCATCGGCACTTCTGTCCATCCGCTTGGC 786555 Query 20295 CAGCACCATATCCGCGCCAGCCTGCCACTTCTCAATGAGATGAGGGATAACTTCTATCGG 20354 || || ||||| || || ||| ||||||| | || | | ||||||||| || || Sbjct 786556 AAGAACAATATCAGCACCCGCCAGCCACTTGTTGATCATCTCAGGGATAACAGTGATGGG 786615 Query 20355 ATCCTGTAAATCGACATCAATAGGAATGACCGCATCCCCGGTTGCATGGTCGAGACCCGC 20414 ||||||||||| |||||||| || || || ||||| |||||||| || || || || Sbjct 786616 GTCCTGTAAATCCACATCAATCGGGATAACGGCATCGCCGGTTGCGGCTTCCAGGCCGGC 786675 Query 20415 GAAAAGAGCAGGTTCTTTACCGAAGTTTCGCGTAAACGAAAGCGGAATAACGAGCGGATC 20474 || || || ||||| || ||||| || || ||||||| || || || |||||||| Sbjct 786676 AAACAGCGCGGGTTCCTTGCCGAAATTACGAATAAACGACAGGCTAAGTACCAGCGGATC 786735 Query 20475 AGATGCAGCT-ATTTTGTTAATTATTGATTCAGTCGCATCTTTACTACCATCATTAATAA 20533 | | || | || | |||| | | | || |||||| | || ||||||| || || Sbjct 786736 -GCTCTGACTCAGTTGGGTAATCAGCGCATGCGTTGCATCTGTGCTGCCATCATCAACAA 786794 Query 20534 AAACGATCTCAATTTCATATTCTTTTAGCTCATTAAACTCACGTACCGTTTTATAGAAAA 20593 |||| ||||||| | | || ||| | | | | | | |||| | ||| |||| Sbjct 786795 AAACAATCTCAACCTGCCAGGCTGCCAGCGCTTCATATTTTCTGACCGCGTCATAAAAAA 786854 Query 20594 TCGGTATCGTGTCTTCTTCGTTAAAAACTGGAACGACAAGAGAGATTTTCATCTTATATC 20653 || || || ||||| ||||| || || || || |||||||||||||| | | || Sbjct 786855 GAGGGATGACCTCCTCTTCATTAAATACCGGTACCACCAGAGAGATTTTCAT-TATTCTC 786913 Query 20654 CCTGAAA-ACAATGAATCTGGAATAGATAAAGCCGCATACCAGGCTAATTGCCGAGAAAG 20712 | | ||| || || || | |||| | | |||||| || |||| || || ||||| | | Sbjct 786914 CTTTAAATACGATAAAGCGGGAAAAAAGAAAGCCACACGCCAGACTGATAGCCGATGAGG 786973 Query 20713 TGATAAGGGTAAT 20725 |||| || ||||| Sbjct 786974 TGATCAGCGTAAT 786986 >seq9 Length=205880 Score = 105 bits (116), Expect = 2e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 40745 TGGCACTCACCGACAAGCAAGAAATGTTCTGTCATGAGTACCTCATCGATTTAAACGCCA 40804 |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 7649 TGGCACTCACTGACAAACAAGAAATGTTCTGTCGCGAGTACCTCATCGATTTAAACGCCA 7590 Query 40805 CGCAAGCGGCGATTTGGGCGG 40825 |||| || || || |||||| Sbjct 7589 CGCAGGCTGCTATCCGGGCGG 7569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133385111070908