Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq83 114 1e-21 seq2 82.4 7e-12 >seq83 Length=66758 Score = 114 bits (126), Expect = 1e-21 Identities = 103/129 (80%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAG---GCAA 14590 |||||||||||||||| |||||||||| ||||||||||||||| | || || | |||| Sbjct 32695 AGTAAAATGGTTTAACTCAGATAAAGGTTTTGGCTTTATCACTCCCGATGATGGCAGCAA 32636 Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650 |||| | |||| || ||||| || ||||| |||| | |||| | ||||||||||| Sbjct 32635 AGATGTATTCGTGCATTTCTCTGCTATCCAGGGTGATAACTACAAAACGCTTGATGAAGG 32576 Query 14651 TCAAAAAGT 14659 ||| ||||| Sbjct 32575 TCAGAAAGT 32567 >seq2 Length=722220 Score = 82.4 bits (90), Expect = 7e-12 Identities = 105/143 (73%), Gaps = 9/143 (6%) Strand=Plus/Plus Query 14529 GGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAG-- 14586 || || || ||||||||||||||||| ||||| || || || ||| || | | ||| | Sbjct 52344 GGTACCGTTAAATGGTTTAACGCAGAGAAAGGCTTCGGTTTCATCTCTCCTGCAGACGGC 52403 Query 14587 -GCAAAGATTTGTTCGCTCACTTCTCAGCAATCCA---ATCTGATGGATTCAAATCACTT 14642 |||||||| | |||| || ||||| |||||||| | ||| ||| ||| | Sbjct 52404 AGCAAAGATGTATTCGTACATTTCTCTGCAATCCAGGGCACCGAT---TTCCGTTCATTA 52460 Query 14643 GATGAAGGTCAAAAAGTTGAATT 14665 ||||||||||| |||||||||| Sbjct 52461 GATGAAGGTCAGCAAGTTGAATT 52483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48450831742274