Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq2 109 1e-19 seq1 109 1e-19 >seq2 Length=722220 Score = 109 bits (120), Expect = 1e-19 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 356 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 415 |||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 337921 ATTGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTAC 337862 Query 416 CGACTGAGCTAACGACCC 433 | |||||||||||||||| Sbjct 337861 CAACTGAGCTAACGACCC 337844 Score = 107 bits (118), Expect = 4e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct 337651 TGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCA 337592 Query 418 ACTGAGCTAACGACCCA 434 ||||||||||||||||| Sbjct 337591 ACTGAGCTAACGACCCA 337575 Score = 107 bits (118), Expect = 4e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 |||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct 337797 TGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCA 337738 Query 418 ACTGAGCTAACGACCCA 434 ||||||||||||||||| Sbjct 337737 ACTGAGCTAACGACCCA 337721 >seq1 Length=970878 Score = 109 bits (120), Expect = 1e-19 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 356 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 415 |||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 112 ATTGGTGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTAC 171 Query 416 CGACTGAGCTAACGACCC 433 | |||||||||||||||| Sbjct 172 CAACTGAGCTAACGACCC 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100696383567660