Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq174 170 5e-38 seq9 125 2e-24 >seq174 Length=42168 Score = 170 bits (188), Expect = 5e-38 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 39264 GGAAAATGAGTAATGGCTAAATCCCCAGCAGAGCGCAAAGCAGCGCAGCGTGCGCGGCAG 39323 ||| | ||| | ||| |||||||||| ||||| |||||||| ||||||||||| | ||| Sbjct 40187 GGAGAGTGACTGATGCCTAAATCCCCCGCAGAACGCAAAGCCGCGCAGCGTGCCAGACAG 40246 Query 39324 TACGCCGCCGGTGAGCGCAAGCTTGAGCTGGTACTGGATGGGCAGGAACTGGAAATGCTG 39383 ||| ||||||| ||||| ||||||| |||||| | ||||||||||| |||||| Sbjct 40247 GCCGCTGCCGGTGGCAAAAAGCTGGAGCTGGCGCTGGATAGTCAGGAACTGGAGATGCTG 40306 Query 39384 GCGCGGAACTGCACAGCCCGTCGCCATGGTCGTGCGCCGTATGACATGAGCGAGTACATC 39443 |||| ||||||| | || || |||| ||||||| |||||||| ||| ||||||||| Sbjct 40307 GCGCAGAACTGCGCCGCACGCCGCCCCGGTCGTGAACCGTATGAGCTGAACGAGTACATA 40366 Query 39444 GCGTTGCTGATCCGCCAGGATG 39465 ||| || | ||||| |||||| Sbjct 40367 GCGCTGTTAATCCGAAAGGATG 40388 >seq9 Length=205880 Score = 125 bits (138), Expect = 2e-24 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 308 CGCCTGGTGGAAATAGACCAGATGGATGTGATCGACATCCTTAACGATGACATGAGTATC 367 |||||| | || || ||||||||||| ||| |||||||| | | ||||||||| | ||| Sbjct 7437 CGCCTGATCGAGATTGACCAGATGGACGTGCTCGACATCATGACAGATGACATGCGCATC 7378 Query 368 AAGCCGGTTTCCGAATGGCCTAAGGTC-TGGCGTCAGTATCTTACCGGTTTCGAGCTGGC 426 || || || || ||||||| | || ||||| | || || | ||| ||||| ||||| Sbjct 7377 AAACCTGTATCGCAATGGCC-AGCCTCATGGCGCCGATACCTGAGCGGATTCGATCTGGC 7319 Query 427 CGACATGTTCGAAGGCCGCGGCGACGAGAAAGAACTTGTTGGCATACTCaaaaaaaTAAA 486 || ||||| |||||||| ||||| ||| || | || || || || ||||| || || Sbjct 7318 TGAGATGTTTGAAGGCCGGGGCGAAGAGCGCGAGATGGTCGGTATCCTGAAAAAGATTAA 7259 Query 487 ATGGCCTGACAAGGTGAAGAACCTCGAGCTTATTGGTAAGCAC 529 ||||| ||||| || | ||| || || || | || || ||| Sbjct 7258 GTGGCCGGACAAAGTCAGGAATCTGGAACTGCTCGGCAAACAC 7216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126816007942074