Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq174 84.2 8e-12 >seq174 Length=42168 Score = 84.2 bits (92), Expect = 8e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 5325 GCTCAGATCTTCGACCGCATGGAGATCGAGGTTCTTCTGTCGACCGAGAACGTCGACGAC 5384 |||||| | || || ||| ||| | | || || | || | ||| |||| ||| ||| Sbjct 17149 GCTCAGTTGTTTGATCGCGAGGATGCCAACGTAGTTATCTCAAGCGAAAACGCCGATGAC 17090 Query 5385 TTCGAAAAGAACATGGTGTCGATCCGTGCGGAGGAACGCCTCGCGCTTGCCGTCTATCGT 5444 || || ||||||||| | || ||||| || |||||| | |||||||| ||||||||| Sbjct 17089 TTTGAGAAGAACATGATCTCAATCCGCTGTGAAGAACGCGTTGCGCTTGCGGTCTATCGT 17030 Query 5445 CCGGAATCGTTTGT 5458 |||||| |||| || Sbjct 17029 CCGGAAGCGTTCGT 17016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175433130659806