Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq11 132 3e-26 >seq11 Length=201304 Score = 132 bits (146), Expect = 3e-26 Identities = 167/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCCGA 25795 || |||||| ||||| ||||| || || || | |||| | |||||||| |||| Sbjct 21277 CAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCC-TATACTCTGCGCCGA 21219 Query 25796 AATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGC 25855 ||| ||||||||||||||| || |||||||| || || || |||||||| || | || | Sbjct 21218 AATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAACC 21159 Query 25856 CCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 | |||||||| ||| | ||| || ||||| | ||||| || || |||||||| |||| Sbjct 21158 CAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGG 21099 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | | ||| || | || || |||| |||||||| ||||| ||| Sbjct 21098 ACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCC 21052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340111197775437