Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq174 80.6 9e-11 >seq174 Length=42168 Score = 80.6 bits (88), Expect = 9e-11 Identities = 152/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 49572 AAAGCCGACAGGAACGCGGATACGGTCGGCCCTGGGAAATCATTCGCGCCCGCATCCTCC 49631 ||||| | || || |||||||| || | | ||||| ||| || || | | || Sbjct 23052 AAAGCAGGCATGAGCGCGGATATGGCAGTCAATGGGATGTCAGACGTGCGAGAGTTCTTG 22993 Query 49632 AGCGTGACAAATACCTTTGCCAGAACTGCCGACGCCAAGGTATCGCCGCAAAAGCTACCA 49691 |||| || |||| || ||| | |||| || | || | || || ||||| | Sbjct 22992 AGCGCGATCGGCACCTCTGTCAGGAGTGCCTGCGAAAGGGCAGACCCACAGCAGCTAAGA 22933 Query 49692 GCGTCGACCACATCATTCCCAAAGCCCACGGCGGTACTGATGACGATTCCAATCTGGAAT 49751 || |||||||||||||| ||||| || || ||||| |||||||| ||| || | Sbjct 22932 CGGTTGACCACATCATTCCGAAAGCACATGGGGGTACCGATGACGACAGCAACCTTCAGG 22873 Query 49752 CGTTGTGCTGGCCGTGCCACAGAACGAAAACCGCAACAGAGAGA 49795 | ||||||||||||||||||| | || || || | ||| ||| Sbjct 22872 CTTTGTGCTGGCCGTGCCACAAGGCAAAGACAGCCAGAGACAGA 22829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164989120619614