Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq3 156 2e-33 >seq3 Length=630259 Score = 156 bits (172), Expect = 2e-33 Identities = 236/336 (70%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223 ||| || |||| |||||| | || | || ||||| || |||||| |||| | || Sbjct 51154 GCCACCCAGCATCTGCATGGTACCACCAACGTTAACCACGACTTCGGTGGTGTAACGCTC 51095 Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283 |||||| |||| ||||||| || |||||||| || ||||||||| |||||||| || Sbjct 51094 CTGGCCACCCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCTTCGATATAGACCTGCGA 51035 Query 11284 GCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTG 11343 || ||| |||||||| | |||| ||| ||||| |||||| ||||| || ||||| Sbjct 51034 TCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAGTTTGCCAAACAGCACCACACGGTG 50975 Query 11344 CCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGC 11403 |||||| ||| ||| | | | |||||||||||||| ||||||||| || || Sbjct 50974 CCACTCAGTGATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTTTCCGACGTAGC 50915 Query 11404 CAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCC 11463 ||| | | | || || || || || || | | | | || |||||||| || Sbjct 50914 CAGCGTAATGTTGGCAACAGCGCCACCATTTGGCATATAACGTACTTCCGGATCCTGACC 50855 Query 11464 CAGATGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499 ||||| ||||| || || || ||||| || || || Sbjct 50854 CAGATTCCCGACAAGAATCACTTTGTTAACGCCACG 50819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208483015836004