Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq13 136 4e-27 >seq13 Length=199142 Score = 136 bits (150), Expect = 4e-27 Identities = 137/177 (77%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 65601 GTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGTACG 65660 || || || || || || ||||| || || |||||||| || | || ||||| || ||| Sbjct 145337 GTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAAACGCACG 145396 Query 65661 GCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGA---TTAACGATTGCA 65717 |||||||| ||||| ||||| || ||||| ||||| ||||| ||| ||||| |||| Sbjct 145397 GCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAAC---TGCA 145453 Query 65718 TCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCAACA 65774 |||||||| || | ||| ||||| || ||||| |||||||| |||||||||||| Sbjct 145454 TCTTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCAACA 145510 Score = 123 bits (136), Expect = 3e-23 Identities = 160/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 6973 ATCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGG 7032 |||||| || ||||| ||| |||||| || ||| ||||||||||| || || || Sbjct 116807 ATCGCCCGGCTGCAGCAGCGCGGTGTAAACCGCAAAGTTAGCCTGTGAACCTGAGTGTGG 116866 Query 7033 TTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCT- 7091 || ||||| ||| ||| | || |||||||||||| || || || || ||||| | || Sbjct 116867 CTGCACGTTAGCGTAATCGGCACCAAACAGTTCTTTTGCGCGATCGATCGCCAGTTGCTC 116926 Query 7092 --CGATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGC 7149 |||| ||| || | |||| |||||||| || |||||||| ||||| || ||||| Sbjct 116927 AACGATATCAACG---TACTCACAGCCGCCGTAGTAGCGTTTGCCCGGATAGCCTTCAGC 116983 Query 7150 ATACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACA 7189 || || ||||| | ||||||||| || | ||| ||| Sbjct 116984 GTATTTATTGGTGAGCTGAGAACCTTGTGCCTGCATGACA 117023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553309546136520