Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq1 214 2e-50 seq3 194 2e-44 seq13 170 2e-37 >seq1 Length=970878 Score = 214 bits (236), Expect = 2e-50 Identities = 370/532 (70%), Gaps = 18/532 (3%) Strand=Plus/Minus Query 41800 CCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTG 41859 || ||||| || ||| |||| || || || || || |||||||| | || || || Sbjct 158670 CCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGCTG 158611 Query 41860 ATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCT---GCGATCGTGAAG 41916 || || | || || |||| || | || || ||||| || || ||||| Sbjct 158610 ATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCC---ACCTCCAGCGCAATTGTGAAA 158554 Query 41917 TATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGTTCT 41976 ||| | || || || || || |||||| | || || || | || || || |||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 41977 AAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAG 42036 || || || |||||||| | ||||| ||| |||||||||| || ||| | ||| Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAG 158434 Query 42037 ACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTAT 42096 || ||||| || |||||||| || || ||||||||||| || || || ||| ||| || Sbjct 158433 ACCGCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCTAC 158374 Query 42097 CCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAG 42156 ||||| |||||| ||||| | |||| ||||||||| ||||| |||||| |||||||| Sbjct 158373 CCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAA 158314 Query 42157 AATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGT 42216 ||||| | |||||| |||| ||||| || ||||| ||| | |||||||| |||| Sbjct 158313 GGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAACAAGCTGATGTATCAGCGC 158254 Query 42217 TTAATCAATAACGATTACATCACACTGTTCAGCC---CTGACGTTGCAAATGATCGCCTG 42273 | | || ||| | ||||| |||||||||| |||||| ||| | ||||| Sbjct 158253 CTGCTGAAAGGCGAAGATATCACCCTGTTCAGCCCGTCTGACG-TGC-----CTGGCCTG 158200 Query 42274 TATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAAGAACTCTATACCA 42325 ||||| || |||| || || ||||| |||||| || |||||||||| Sbjct 158199 TATGACGCATTCT-TC--GCCAATCAGGATGAGTTTGAGCGCCTCTATACCA 158151 Score = 87.8 bits (96), Expect = 2e-12 Identities = 208/312 (67%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 43564 CAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTGTCATTCTTCTGGCGACCG 43623 |||||| || | | || |||| ||| ||||| || || || ||||||||||| ||| Sbjct 156840 CAAAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGGCGTCCG 156781 Query 43624 GAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAA 43683 ||||| || || | || ||| || || | || ||||||| || || ||| Sbjct 156780 GAAGAGGTCGACGTTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGATCATGAAAAA 156721 Query 43684 ATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGC 43743 || ||| |||||| | ||||| || ||| | ||| | |||||||| || || Sbjct 156720 CATATCTTTATCAGCAACCTGAAGTATCAGACGCTGCTGGATTCGATTCAGGGCCGCAGC 156661 Query 43744 CCTAACCTGGCGTTTCTCCCGATTGCCTCTGATGTTTCAA-TGGAAACGTGGATCGAAAC 43802 || ||| | ||| | || ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 156660 CCGAACGTCGCGCTGCTGCCGCTGATCTC-GATTCCTGAACTGGAAACCTGGATTGAAAC 156602 Query 43803 ATGGGCTTTCAGTGAAACAATTCATAGCCGCAGTTATACACACATTCAGCGTAACTTGCA 43862 ||||| ||| || || ||||| ||| ||| || ||||| |||||| | Sbjct 156601 CTGGGCGTTCTCAGAGACGATTCACTCCCGTTCTTACACCCACATCATCCGTAACATTGT 156542 Query 43863 TATCGACCCGGC 43874 || ||| ||||| Sbjct 156541 TAACGATCCGGC 156530 >seq3 Length=630259 Score = 194 bits (214), Expect = 2e-44 Identities = 1076/1692 (64%), Gaps = 65/1692 (4%) Strand=Plus/Minus Query 155619 GCCCGTGCATACATCGAATATCGTCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 155678 ||||| || ||||| ||||| || |||||||||||| | ||||| || | | || || Sbjct 230075 GCCCGCGCCTACATTGAATACCGCCACGATCGCGATGTCGCCCGCGATCGTCAGAGCCAG 230016 Query 155679 CTGTTCAAAGATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGAGAAC 155738 | | | || ||| |||| ||| | |||| | | | |||||||| Sbjct 230015 TTACATCACGCCATTCGCGGACTGGTCGATCAGACCAATGCGGCGCTGCTGAACGAGAAT 229956 Query 155739 GCGAACAAACAC-GCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGGTATTGTAGC 155797 || |||||| || |||| | || |||||| |||||| || ||||||| || || || || Sbjct 229955 GCCAACAAAGACAGCAAAGTGAT-CCCGACGCAGCGCGATCTGCTGGCCGGGATCGTGGC 229897 Query 155798 GAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTCCGG 155857 || || | ||| | | || ||||| ||| || | || ||||| || ||| Sbjct 229896 AAAACACTACGCACAGCAGCAGATCCTGCCGCGCGATGTGGTGCTGGCGCACGAGCGCGG 229837 Query 155858 CGACATCCACTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGCTGTC 155916 ||| ||||||||||| ||||| || ||| ||| ||| | | || | |||||| | Sbjct 229836 CGAGATCCACTATCACGATCTCGACTACTCCCCTTTCTTCCCGATGTTC-AACTGCATGC 229778 Query 155917 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 155976 || | ||| ||||||| |||||| | || || ||||| ||||| || || || ||||| | Sbjct 229777 TGATCGATCTGAAAGGCATGCTGACCAACGGTTTCAAAATGGGCAATGCTGAGATCGAGC 229718 Query 155977 CCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCTT 156036 | || ||||| |||| || || || | | ||| ||||||| ||| ||| | || Sbjct 229717 CGCCTAAATCGATCGCCACCGCCACCGCCGTGACGGCGCAGATCATCGCGCAGGTCGCCA 229658 Query 156037 CTCACCAGTACGGCGGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGCTCCGTATGC 156094 || |||||||| || ||| || || || | ||| |||||||||| |||| || Sbjct 229657 GCCATATTTACGGCGGCACCACCATT--AACCGTATTGATGAAGTGCTGGCCCCGTTTGT 229600 Query 156095 AGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTTAGATCG 156154 || || |||| |||| | | |||| | ||| | || || || || Sbjct 229599 TGAGCAGAGCTATGCCCGGCATCTGGCGATTGCTGAGCAGTGGCAGATCCCG-CAGGCCG 229541 Query 156155 TACA-TATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAATCGTATGAA 156212 || |||||| | || || ||||| ||| | || || || || ||| ||| Sbjct 229540 AGCAGTATGCGCGCCAGCGTACGGAGAAAGA-GTGCTACGACGCCTTTCAGTCGCTGGAA 229482 Query 156213 TACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATTACTTTC 156272 || || || || || ||||| || |||||||| || || || || || || || ||| Sbjct 229481 TATGAGGTGAATACCCTGCACACCGCCAACGGCCAGACGCCGTTTGTCACCTTTGGTTTT 229422 Query 156273 GGTACTGGTACGGGAATGTTTGAACGGATGATCCAGAAAGCTATTCTGAAAAACCGTATC 156332 ||| || |||| | | ||| |||| ||| | | |||||| ||||| | Sbjct 229421 GGTCTGGGGACGGACTGGGCGGCCCGGCTGATTCAGCAGTCGATTCTGCTTAACCGGCTG 229362 Query 156333 CGTGGCCTGGGTAAAAAAGGTATTACTCCGGTATTCCCTAAACTGGTTATGTTCATGGAA 156392 || ||||||||||| | | || |||| |||||||||||||| | ||| Sbjct 229361 GCCGGACTGGGTAAAAATCGCAAGACGGCGGTGTTCCCTAAACTGGTGTTCAGCATTCGC 229302 Query 156393 AAAGGCATTAACCTTGATCCAGAGGATCGCAACTATGACATCAAACAACTGGCTCTGGAA 156452 ||||| | |||| | | || || || || |||||||||||||| ||||| Sbjct 229301 GAAGGCGTCAACCGCCGGGCGGGCGACGTTAATTACGATATCAAACAACTGGCGCTGGAG 229242 Query 156453 TGCGCTTCAAAACGTATGTACCCAGATATCATTAGTGCATATAATAA--CCGTCGCA-TC 156509 ||||| || || ||||| || || ||| | | | || || | || | || Sbjct 229241 TGCGCCAGCAAGCGGATGTATCCCGACATCCTCAAT---TACGATCAGGTGGTTAAAGTC 229185 Query 156510 ACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGTCGCAGTTTCCTTAGTGTGTGGCAT 156569 || || | |||| | | | || ||||| || || ||||||||| | || | || Sbjct 229184 ACCGGCT----CGTT--TAAAACCCCAATGGGCTGCCGTAGTTTCCTTGGCGTTT---AT 229134 Query 156570 GATGATAACGGTAATGAAGTTCTGGATGGACGTAATAACCTGGGTGTGGTGACAATCAAC 156629 || || ||||| | | ||| || || || || || | || || | | | ||| Sbjct 229133 GAAGAGAACGGCGAGCAGATTCATGAGGGCCGCAACAATATCGGGGTAATCAGCCTGAAC 229074 Query 156630 CTCCCGCGTATTGCTCTTGAAGCACAATCGCAGGAAGATGAAGACGCACATGACGCATTC 156689 || ||||| || || || |||| || | ||||||| ||| | ||| Sbjct 229073 CTGCCGCGCATCGCACTGGAAG------CGGGCGGTGATGAAG-CGCGC--------TTC 229029 Query 156690 TGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTG-AAGCCCTGATGACTCGCATCGA 156748 ||| | || |||| || ||| | ||| ||| | || |||||||| || | | Sbjct 229028 TGGACGCTGCTCGATGCGCGACTGCAGCTG-GCTAAGCGGGCGCTGATGACGCGGGTGGC 228970 Query 156749 TAGCCTACGCGGTG-TTAAAGCCAGTGTAGCCCCGATCCTGTACACGGAAGGTGCATTCG 156807 | || | | | ||||| | || || || ||||| || | |||||| || | | Sbjct 228969 GCGGCT-GGAGAAGACCAAAGCGCGCGTCGCGCCCATCCTCTATATGGAAGGCGCCTGTG 228911 Query 156808 GTGTTCGTCTGAATCCTGATGATGAAATCCTGGAAC--TGTTCAAAAATGGGCGTAGCTC 156865 | ||||| |||||| | ||||||||| || || | | ||| ||||| ||| || Sbjct 228910 GCGTTCGGCTGAATGCGGATGATGAAGTC--GGTCCTATTTTCCGTAATGGCCGTGCGTC 228853 Query 156866 TATCAGTCTGGGTTATATCGGATTGCATGAAACGCTGTTAAT--GTTCGGCTCCGG---T 156920 | ||||| |||||||| |||||||||| ||| ||| | || || ||| | Sbjct 228852 GCTGTCGCTGGGCTATATCGGCCTGCATGAAACCCTG--AATGCGCTCAGCGGCGGTCAT 228795 Query 156921 CAACATCCGTTCGAT----CGTATTGGCTCTCAAAATGTGGGTAAACTGATTCTGGAATA 156976 || ||||| | |||| || | || | | ||| ||||| | ||| | | || Sbjct 228794 CAGCATCCTTACGATGACGCGGCTCTGCGCGCCAAA--GGGGTAGA--GATCATTGCTTA 228739 Query 156977 TCTACGCGCCGCGACCGAGGCATGGAAAAAGAAAACTGGATTTGGTTTCAGTCTGTATTC 157036 || |||| || |||||| |||||| |||| || | ||| ||||| || || Sbjct 228738 CCTGCGCGATGCCACCGAGCGCTGGAAAGCAGAAACAGGCTATGGGTTCAGCCTTTACAG 228679 Query 157037 AACCCCTGCCGAATCTCTCTGCCATCGCTTCTGTAAGCTGGACTTTGAGAAGTTCGGGAG 157096 || || ||| ||| ||| | |||||||| || || | | |||| || Sbjct 228678 CACGCCAAGCGAGAATCTGTGCGACCGCTTCTGCCGTCTTGATGCGGCGCAGTTTGGCCT 228619 Query 157097 TGTGAAAGGGATCACGGATAAAGGCTGGTACACAAACAGTTTCCATCTGGACGTAGACCG 157156 ||| ||| | || || || |||| ||||| ||||| |||||||| ||||| || Sbjct 228618 GGTGCCAGGCGTTACCGACAAGGGCTACTACACCAACAGCTTCCATCTCGACGTTGAGAA 228559 Query 157157 CACAGTGACACCGTTCGAGAAAATCGACTATGAAGCCGATTATCATTACATTGCATCTGC 157216 | || | || | ||| |||||||||| |||||| |||| | || || Sbjct 228558 GAAGGTCAATCCTTACGACAAAATCGACTTTGAAGCGCCCTATCCGCCGCTGGCGAATGG 228499 Query 157217 TGGTCATATCAGTTATGTCGAATTCCCTGATATGAAAAACAACCTGCAAGCCCTGGAAAA 157276 || ||| |||| | ||||| ||| || || | ||||||| | || ||||| | Sbjct 228498 CGGATTCATCTGTTACGGCGAATACCCGAATGTGCAGCACAACCTCAAGGCGCTGGAGGA 228439 Query 157277 AGTCTGGGATTA 157288 ||||||||||| Sbjct 228438 TGTCTGGGATTA 228427 >seq13 Length=199142 Score = 170 bits (188), Expect = 2e-37 Identities = 145/179 (81%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979 ||||||||||||||||| || ||||| || || || || |||||||| ||||||||||| Sbjct 145509 GTTGAAGGTGGACAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCA 145450 Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039 || ||||||||||| || || || ||| | || |||||||||||||| ||||| || || Sbjct 145449 GTTAAACATCCTGAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGT 145390 Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAG 52098 ||||| |||| || || || || ||||||||||| || || | |||||||| ||||| Sbjct 145389 TTTAACTCACTCACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAG 145331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577426026010400