Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq174 91.5 4e-14 >seq174 Length=42168 Score = 91.5 bits (100), Expect = 4e-14 Identities = 224/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 27556 CCCCAGTAGGCGATGCCGCGGAACA-CGCTCGCGATGTCCTGCAACACCTTGAACGCGTC 27614 |||||| | | ||||| ||||| | ||| ||| ||||||| || || | |||| || Sbjct 6737 CCCCAGAACGTAATGCCACGGAATATCGC-CGCAATGTCCTTCAGAACGGTATACGCATC 6795 Query 27615 GGCCGCCGACT--GGATCACGCAGTTGCAGGCGAATCGCGGCTCGACGCCGCCTTTTCCG 27672 | || |||| | || | ||| |||| || |||||||| |||||| ||| Sbjct 6796 --CTGCTGACTCTGTATGAACACGTTACAGGTAAAGCGCGGCTCCGTTCCGCCTGCGCCG 6853 Query 27673 TCCGACACCATCACATCGCAGTAGCGCGCGATTTCGTACAGCCCCCACTTGTCGATCATC 27732 || ||||||||| ||||||||| ||| || ||| ||| |||||||||||||||| Sbjct 6854 TCAGACACCATCTGATCGCAGTACTGCGAAATACTGTAAAGCTCCCACTTGTCGATCATG 6913 Query 27733 GATGCATCGACGGTCTTTCCGAGCCCGTAGCGCTCGTTCAACAGCAGGTCGTAGAAGATC 27792 | |||||||| | | || | || | | | || || |||||| ||||| ||| Sbjct 6914 GTGGCATCGACACGCGTCCCCATACCAAATATTTTATCCAGCACCAGGTCATAGAAAATC 6973 Query 27793 CACGCGGGATTGTTCGTCCATGCCGGTTTGAACGTGCCGTCCCACGTGCCCGAGTACGTG 27852 || || || || | || | || |||||| || | |||||| || | || | Sbjct 6974 CATGCCGGGTTATCGGTATAGGCGTATTTGAAATCACCCTGCCACGTTCCGGCATAACTA 7033 Query 27853 CGCGTCTCAGGATCGTAGTTCGACGGCACACGCAC 27887 || | ||||||| ||| | | |||||| || || Sbjct 7034 CGTGAAACAGGATCATAGGTTGTCGGCACGCGAAC 7068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143406753058004