Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq9 441 2e-119 seq174 104 6e-18 seq2 80.6 7e-11 >seq9 Length=205880 Score = 441 bits (488), Expect = 2e-119 Identities = 988/1462 (68%), Gaps = 39/1462 (3%) Strand=Plus/Plus Query 30034 TTCGTCTGGTGTGTAGACGCCCATGATTACGTCAGGACAGTGCAAGCGAGACCAGCGTTT 30093 ||| || |||||||| || |||| || ||||| || ||||||| || | ||||||||| Sbjct 168186 TTCATCCGGTGTGTACACCCCCAGAATGACGTCCGGGCAGTGCAGACGGGCCCAGCGTTT 168245 Query 30094 TGTCGCAAGGTATGCGAGTTGTTGTTTCGGATCACTGGCCCAAAGTGTGGAGTTTCTTAC 30153 || || || || || || || |||||| || ||||| ||||| ||||| | || Sbjct 168246 AACAGCGAGATAAGCCAGCTGCTGACGCGGATCGCTCGCCCAGAGTGTTGAGTTCCGCAC 168305 Query 30154 CTGTGCTTGAGACAGCATTAACTCAAGCACTCGAGGTTGATCCTCGCCCTTCATGGTTGC 30213 |||||| || || |||| | || ||||| || || | | |||| |||||| ||||| Sbjct 168306 CTGTGCCTGTGAGAGCAGCAGTTCCAGCACCCGCGGCTCCTGCTCGTTCTTCATTGTTGC 168365 Query 30214 CCATACGCGAACACCGCAGCCTTCTTCGTCTTTTAGAGTCCAGCCTGGTGCGATATATGG 30273 ||| || ||||||||||| || ||| || | || |||||| | |||||||| ||| Sbjct 168366 CCACACCCGAACACCGCATCCGGATTCATCCTGCAGTGTCCAGTCCGGTGCGATGTATTT 168425 Query 30274 ATTGCCGTTTTTGGAT---GTTTTCTCAACAAACTTACCGATCACGCGTTCCCACGGCCC 30330 |||||| ||||||| |||||||| || | ||||| || |||||| ||||| Sbjct 168426 ATTGCC---TTTGGATGAGGTTTTCTCGGTGAATCTGCCGATAACATTTTCCCATGGCCC 168482 Query 30331 GAACCACTCGTAGTTGATGCGATCTTTTGTTGGCGACATCGTTGAGATAACTGCGTTTAC 30390 ||||| ||||| | || ||||| || || | ||| || ||| ||||| || || Sbjct 168483 AAACCATTCGTAATGGAGCCGATCCCGTGCCGGGGCCATGGTGTTGATCACTGCATTCAC 168542 Query 30391 TAATTGGGCTTCATAACCTAGCGTGCCGTTCACAACATGGGTTTTCTGAGCCACGGCAAA 30450 | || || || || || || ||||| || |||||| || || |||||||| Sbjct 168543 CAGCTGTGCCTCGTATCCCAGAACACCGTTGACGGTGAAGGTTTTTTGGGCGACGGCAAA 168602 Query 30451 CGGGTTCATTCCCCACTGCGCAGCCTGCATTGCCACGGCCATGCAATCAGCTGGTTTCCC 30510 ||| ||||| | ||||||| |||||||| | ||| |||| || || || | ||| || Sbjct 168603 CGGATTCATACGCCACTGCAGGGCCTGCATGGTCACAGCCAGACAGTCTGCGGCTTTGCC 168662 Query 30511 GGCGAGGTGCGCCGGTACCGTTACGCGGCTTTGCGCCATTACCTCGGCGAATTTCATCAG 30570 ||||| |||||||| || || || | ||| ||||| | || || || || ||| Sbjct 168663 CGCGAGATGCGCCGGGACAGTGACTCTGCTGCTGGCCATGATTTCTGCAAAGCGCACCAG 168722 Query 30571 TTGGTTCAAGCCGTCTGGGCTGAAAATAGTTGCAGCAGTTCCAGCGATTGCTGTGTCTAC 30630 || | || | | || |||||||||||||| |||| || ||| |||||| | Sbjct 168723 TTTATCCAGGGCATCGGGGCTGAAAATAGTGGCAGTTGTGTCAG----TGCTGT-----C 168773 Query 30631 TGGTGCGTTGATGTTTGCGATGTCGTTGCTCATATGTACATATCCTGTTTTGCGTGCCCA 30690 || || ||| | | | || ||| |||| | ||||| || ||||||| Sbjct 168774 GGGCGCAGAGATCATCG-GTTGATTTTG--CATAACGCCTACTCCTG-TTAATGTGCCCA 168829 Query 30691 CTCAGGGCGTTTAATGATTTCCACACCGCCCCATTCATCATTTATGCGGCATTCGTGATA 30750 | ||||| | ||| ||||| | |||||||| | || | ||| || || | Sbjct 168830 TGCGGGGCGCTGAATTATTTCTATGCCGCCCCAGTTATTGCCGAGGCGACAGGAATGGAA 168889 Query 30751 GGTATTCAGATCCCGGCGGAACAGAGC-GTGCCCGGCATC--GACATCCGGCGCATCCAG 30807 || ||| ||||| ||||| || || | |||| || | ||| | || | ||| Sbjct 168890 AGTGCACAGGTCCCGACGGAAGAGGGCGGATCCCGCGCTCATGTCAT-TGTCG--TGCAG 168946 Query 30808 CTCGAACACGCGTACCGGATACCGACCACAATCAATGCTTTCGCTCACGGCAAGAAAGAA 30867 ||| ||||| || |||||||| || ||||| || || ||| || || |||| ||| || Sbjct 168947 CTCAAACACACGAACCGGATAACGGCCACAGTCGATCGCTTCACTGACCGCAATAAA-AA 169005 Query 30868 AAAACCATGCGGCT---GACCAGTAACCCTCAT-TGCGCCTTCGCGGTACATTGCGTCCT 30923 ||| ||||| | ||||| | | || ||| |||| |||||| || ||| Sbjct 169006 CGAAC--TGCGGATATGTGCCAGT-GCAGTGATAAAAGCCCTCGCAGTACATGGCTGCCT 169062 Query 30924 GCACGTGGTAGCGGAATTCCTCGATGTGGCGTGCAAAACGGTCCATATCTGCAACCTTTT 30983 | |||||||| ||||| | ||||||||||| ||||| || |||||| ||||||| Sbjct 169063 GAACGTGGTACCGGAACGCTTCGATGTGGCGGGCAAAGCGCGACATATCACTCACCTTTT 169122 Query 30984 TCACGTCGACGATCACGTTGTGCTCGTTCAGCCATTTGTCTGGACGAATGCGGCACAACT 31043 ||||||||||||| | | | | |||| |||| ||||| || ||||| || | | Sbjct 169123 TCACGTCGACGATGAGAGGGCGATTCGTCAGATATTTATCTGGCCGGATGCGACAGAGTT 169182 Query 31044 CACCAGTATCTTCATCATTCCAGTACATTGATGCTTCGCAGAAACCAGGTGCTTCCAGCA 31103 | | || ||| |||| |||||| | || | ||||||| || ||||| || | Sbjct 169183 CTTCTGTCTCTGCATCTGACCAGTAGAGGGAGGATTCGCAGTGGCCGTCAGCTTCAAGAA 169242 Query 31104 TCCAGCGTGCCGCCGGGTGAGCCATTGCGCTATCACGCATCAGCTCCAGTTTCCGCCACT 31163 ||||||| || | || |||||| |||| || | ||| |||| |||||||| | || Sbjct 169243 AAAAGCGTGCGGCGTGATGCGCCATTACGCTCTCTCTCATGAGCTGAAGTTTCCGGCCCT 169302 Query 31164 GCTCGGCATCAAGTACCGTAAT-CCCCATATCCGCTACATCACGAAGAAATGCTTCTTCG 31222 | || ||||| | ||||| || || || || | ||| ||||||||| ||||| Sbjct 169303 GTTCTGCATCCATGACCGTCATGTTCCGGATGCG-TGTCTCATTCAGAAATGCTGCTTCG 169361 Query 31223 TCAGCTTTACCTTGTTTCGTCCGACGATCGAACTTCGGTGAAACAATGAAGCGTTTGTCG 31282 || |||||||| || || || || | || || | ||||| ||||| || || Sbjct 169362 TCTGCTTTACCCTGAGAGGTGCGCCGGTTAAAAGAAGGAGCCACAATAAAGCGCTTATCA 169421 Query 31283 AATTCTCCAGGCTCCAGAAGCAGACAGTGCAATGCGGTTCCAATATCCAGTGCAGACTTT 31342 || | | ||||||| || |||| ||||||| ||| |||| ||||||||||| | || Sbjct 169422 AACTGTTCAGGCTCAAGCAGCATGCAGTGCAGCGCGCTTCCCATATCCAGTGCGGCTGTT 169481 Query 31343 TTCTCTTCGTCTTCTGGTGC-TGCCTG-GACCCATTTAAGAAGCGACGGATTCTTGGCAA 31400 || || || | || || || || | | | || || | ||| || |||| Sbjct 169482 TTATCCGTATCCACAGGCGCATGTTTGCGCCAGAGGTA--AATGGCCGGGTTAACCGCAA 169539 Query 31401 CCATGTCCAGTTGCGACTTACTCACGCCGTCACCGGCGTGGTAGTCTTCGTTGCTGATGT 31460 || || ||||| ||||| |||||| ||||||||| ||| | || ||||||| | Sbjct 169540 TGTCATCGAGCTGCGATTTACTGACGCCGGGACCGGCGTGATAGGCCTCATTGCTGAGGC 169599 Query 31461 CGAAATAAATTCCCGGTTTCAT 31482 | ||| || ||||||||||| Sbjct 169600 CTTCATAGATACCCGGTTTCAT 169621 >seq174 Length=42168 Score = 104 bits (114), Expect = 6e-18 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38764 TGATGGCTAAATCAGCAGCAGAGCGCAAAGCCGCTCAGAGAGCCAGACAAGCTGCATCTG 38823 ||||| ||||||| | ||||| ||||||||||| ||| | |||||||| || || | | Sbjct 40197 TGATGCCTAAATCCCCCGCAGAACGCAAAGCCGCGCAGCGTGCCAGACAGGCCGCTGCCG 40256 Query 38824 GTGTGCGTAAGCTGGAAATTGTGCTTGATGCTCAGGAAATTGAAATGCTGGAGCGTAACT 38883 ||| |||||||| | | ||| ||| ||||||| | || ||||||| || |||| Sbjct 40257 GTGGCAAAAAGCTGGAGCTGGCGCTGGATAGTCAGGAACTGGAGATGCTGGCGCAGAACT 40316 Query 38884 GTGCTACGCGTCGCCCCGGGCGTGCGCCTTACGAATTTGGTGAGTATATAGCGTTACTGA 38943 | || | || |||||||| |||| || || || | ||||| |||||| | | | Sbjct 40317 GCGCCGCACGCCGCCCCGGTCGTGAACCGTATGAGCTGAACGAGTACATAGCGCTGTTAA 40376 Query 38944 TCCGCCAGGATG 38955 |||| |||||| Sbjct 40377 TCCGAAAGGATG 40388 >seq2 Length=722220 Score = 80.6 bits (88), Expect = 7e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2865 CAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCCAACTGAGCTAA 2923 ||||||||||||||| |||| || ||||||||||| | |||||| |||||||||||||| Sbjct 220876 CAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCCAACTGAGCTAA 220818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125001745168548