Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq1 428 2e-115 >seq1 Length=970878 Score = 428 bits (474), Expect = 2e-115 Identities = 765/1111 (69%), Gaps = 18/1111 (2%) Strand=Plus/Minus Query 51846 GGAAATCTGTAATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGC 51905 ||| | || | ||||||||| | || || ||||| | ||| ||| | || | ||||| Sbjct 156944 GGACAACTTTTATGGCTTACTCCACTTTCTCACAGAACAAAAATGATCAGCTGAAAGAGC 156885 Query 51906 CAATGTTCTTTGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATAT 51965 | ||||| || |||||| ||| ||||| || || | ||||| || || || | ||| | Sbjct 156884 CGATGTTTTTCGGTCAGTCCGTAAACGTGGCGCGCTTCGACCAGCAAAAATATGACATCT 156825 Query 51966 TCGAGAAGTTAATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTT 52025 | || ||| | || || || || | || ||||||||||| ||||||||||| ||||||| Sbjct 156824 TTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGGCGTCCGGAAGAGGTCGACGTTT 156765 Query 52026 CCCAGGACCGTATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTA 52085 | | || || || ||||| ||| ||| || | | ||| |||| || || | ||| | Sbjct 156764 CACGCGATCGCATCGATTACCAGGCGCTGCCGGATCATGAAAAACATATCTTTATCAGCA 156705 Query 52086 ATCTTCGTTATCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGC 52145 | || ||||||| || || || || |||||||| || | || ||| | ||| Sbjct 156704 ACCTGAAGTATCAGACGCTGCTGGATTCGATTCAGGGCCGCAGCCCGAACGTCGCGCTGC 156645 Query 52146 TTCCAATCGTGAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGA 52205 | || | | ||||||||| |||| || ||||||||||||||| | ||||| |||| Sbjct 156644 TGCCGCTGATCTCGATTCCTGAACTGGAAACCTGGATTGAAACCTGGGCGTTCTCAGAGA 156585 Query 52206 CTATTCATTCACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTA 52265 | ||||| || |||||||| ||||||||||| ||||| ||||||| || || || || Sbjct 156584 CGATTCACTCCCGTTCTTACACCCACATCATCCGTAACATTGTTAACGATCCG-GCGGTA 156526 Query 52266 -TCTTTGATGAAATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCCCAA 52324 | ||||| || ||||| || || || || || ||| || || | ||||| | Sbjct 156525 GTTTTTGACGATATCGTTACCAATGAGCAGATTCTGGCGCGTGCTCAGGATATCTCACGC 156466 Query 52325 TATTATGACGAACTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGCCAT 52384 ||||| ||||| || | | || | ||||| | | || ||||| | ||| Sbjct 156465 TATTACGACGATCTGATTGAGATGACCAACTACTGGCATCAGCTGGGTGAAGGCACGCAT 156406 Query 52385 GCTGGTCATG---AAA----------TTAGTCTGCGTGAGTTGAAGAAGAAGCTGTATTT 52431 | ||||| ||| | || ||||| | |||||||| |||| ||| | Sbjct 156405 -CAGGTCAACGGCAAACCGGTTGTCGTCAGCCTGCGCGCCCTGAAGAAGCAGCTCTATAT 156347 Query 52432 ATGCCTCATGTCTATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTC 52491 ||||| ||| ||||||| ||||||| || || |||||||||||||| || || || Sbjct 156346 CTGCCTGATGAGCGTCAATGCGCTGGAAGCGATCCGTTTCTATGTCAGCTTCGCCTGTTC 156287 Query 52492 ATTTGCCTTCGCAGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGC 52551 || || ||||| || ||| || | |||||||| |||||||| || || | ||||| Sbjct 156286 CTTCGCGTTCGCTGAGCGTGAGCTGATGGAAGGCAATGCCAAAATCATCAAGCTGATTGC 156227 Query 52552 ACGAGATGAAGCACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGTGG 52611 || |||||||| || || |||| || || ||||||||||||||||| || || || Sbjct 156226 CCGCGATGAAGCGCTGCACCTGACCGGCACCCAGCACATGCTGAACCTGCTGCGCAGCGG 156167 Query 52612 AAAAGATGACCCAGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATT 52671 |||| || || || ||| || ||||| || || ||||| |||| ||| | | Sbjct 156166 TGAAGACGATCCGGAGATGAAAGAGATTGCGGCAGAGTGCCGTGAAGAGTGCTTCGAGCT 156107 Query 52672 GTTCGAAGATGCTGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTC 52731 ||| | | || || | || ||||| || ||||| || ||| |||||| | ||||| Sbjct 156106 GTTTAAGAAAGCAGCACTGCAGGAGAAAGAGTGGGCAGAATATCTGTTCAGCGGCGGCTC 156047 Query 52732 TATGATTGGCTTAAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCG 52791 ||||| ||| | ||||| | ||||| ||| || | || || ||||| ||||| || Sbjct 156046 AATGATCGGCCTGAACAAAGATATTCTCTGCCAGTACATTGAGTACATCACCAATATCCG 155987 Query 52792 TATGCAAGCAGTTGGATTAGATGCTCCATT-CAAAGGTGCAACTAACCCGATTCCGTGGA 52850 |||||| || || || | ||| || || || | | || | ||||| || || |||| Sbjct 155986 TATGCAGGCTGTCGGCCTTGATTTGCCGTTCCAGACGCGC-TCAAACCCAATCCCATGGA 155928 Query 52851 TTAATGCATGGTTGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTT 52910 |||| | ||| || || || || |||||||| || |||||| ||| | || | Sbjct 155927 TTAACTCCTGGCTGGTCTCTGACAACGTTCAGGTTGCGCCGCAGGAAGTGGAAGTGAGCT 155868 Query 52911 CCTACCTGGTCGGGCAAATTGACTCCGAAGT 52941 |||| ||||| || || || || || ||||| Sbjct 155867 CCTATCTGGTGGGTCAGATCGATTCTGAAGT 155837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169385588081386