Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq13 372 3e-98 >seq13 Length=199142 Score = 372 bits (412), Expect = 3e-98 Identities = 664/953 (70%), Gaps = 22/953 (2%) Strand=Plus/Plus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || || |||||||||||| | || || || || || |||||||| || || ||| Sbjct 180457 GCAATTAACTGGAACCGCATTCAGGATGACAAAGATCTTGAAGTGTGGAATCGTCTCACC 180516 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGT-CCAGTCGTGGCACCA 156053 | ||||||||||||||||||||| | ||| | ||||| || | || | | ||||| Sbjct 180517 AGCAACTTCTGGCTGCCGGAGAAAGTGCCGCTCTCCAACGATCTGCCCGGC-TGGCAGAC 180575 Query 156054 GCTGACCGAGGAAGAGC-GC--CTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCT 156110 |||| || || ||| || | | | ||||| ||||||||||||||||||||| | || Sbjct 180576 GCTG---GATAAACAGCAGCAGCAGCTGACCATCCGGGTGTTCACCGGCCTGACGCTACT 180632 Query 156111 GGACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCA 156170 |||||||||||| | |||||||| ||| || || ||||| |||||||| Sbjct 180633 TGACACCATCCAGAACGTGATCGGCGCGCCGGGGCTGATGGAAGATGCCATTACCCCGCA 180692 Query 156171 CGAGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGC-GTGCACGCACGCAGCTAC- 156228 || ||||||||| | || ||| || ||||| ||| ||||| || ||| |||| Sbjct 180693 TGAAGAGGCGGTGCTGTCGAATATCAGCTTTATGGA-AGCGGTGCATGCCCGCTCCTACA 180751 Query 156229 --TCGAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGT 156286 ||| |||||||| || ||||| |||| |||| | || ||||| | | ||| Sbjct 180752 GTTCG---ATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCCGCTTATCAGTGGA 180808 Query 156287 CGGAGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTG 156346 || ||||| || |||||||| ||||| ||| | || ||||| | | | Sbjct 180809 GCGAAGAGAATGCGCCGCTGCAGAACAAGGCACGCATCATCCTGGAACACTACCAGGCCG 180868 Query 156347 ACGACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCG 156406 | || ||||| ||| ||| ||||| | | |||||| || ||||||| || Sbjct 180869 ATGATCCGCTGAAGAAGAAGATCGCCAGCGTTTTCCTGGAGTCGTTTTTGTTCTATTCCG 180928 Query 156407 GCTTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGA 156466 |||||| |||||||||| ||||||| || |||||||| ||||||||||| ||| ||| Sbjct 180929 GCTTCTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGCTGACCAACACCGCTGACCTGA 180988 Query 156467 TCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGA 156526 | || || || || || || ||||| |||||||| ||||||||||| ||||| | ||| Sbjct 180989 TTCGCCTGATTATTCGCGATGAGGCGGTGCACGGTTACTACATCGGTTACAAATATCAGC 181048 Query 156527 AGGGCCTGG-AGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAG 156585 ||| |||| | | || | | |||| | || || || | | | ||||||| Sbjct 181049 AGGCGCTGGCTGCCGCTGA-CGATCTGCGCCGCGAAGAGCTGCAGCAGTTCGCCTATGAT 181107 Query 156586 CTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACC 156645 |||||| | | ||||| || ||||| || || ||| ||| ||||| | || Sbjct 181108 CTGCTGCTGGCGCTGTATGAGAACGAAGTGGCTTATACCGAGGCGCTCTATGCCGATGTT 181167 Query 156646 GGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAAC 156705 ||| | ||||| ||||| | ||||||| ||||||| |||||| || || ||| Sbjct 181168 GGCTGGGTAGAGGAGGTGAAAACCTTCCTGCACTACAACGCCAACAAAGCGTTGATGAAT 181227 Query 156706 CTGGGCTACGACGCGCTGTT-CAGCCGCAGC-GACTGCGACGTCAACCCGGCCATCCTGA 156763 |||||||| || |||||||| | | || ||| ||| ||| || || |||||||| ||| Sbjct 181228 CTGGGCTATGAGGCGCTGTTCCCGGCGGAGCTGACAGCG--GTGAATCCGGCCATTCTGT 181285 Query 156764 GCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGT 156823 || ||||||||| | ||||| ||||||||||||||||| || || ||| | | | Sbjct 181286 CGGCTCTGTCGCCCAACGCCGACGAAAACCACGACTTCTTCTCCGGTTCAGGCTCCTCCT 181345 Query 156824 ACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGATGG 156876 | || |||| || | || | |||||||| || |||||| | |||||| || Sbjct 181346 ATGTGATGGGAAAAGCGGTCGAAACCGAAGATGAGGACTGGAATTTCTGAGGG 181398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526556476184880