Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 >seq1 Length=970878 Score = 125 bits (138), Expect = 8e-24 Identities = 276/411 (67%), Gaps = 2/411 (0%) Strand=Plus/Plus Query 144908 CATCAGGTCATTCAACTGGATTCCGTAGTCCATATGTCGAATACGGTTTTCATCAACGCC 144967 |||||| | || | ||| | || |||||||| || || | ||||| | ||||| || Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 144968 CTTGTTATTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AG 145026 ||| || ||||| || ||||| |||| | ||||| |||||| || || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 145027 CAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAAT 145086 | || || ||||||||||| | || || || ||||| || || || || |||||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 145087 GTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTT 145146 | || |||| || ||| |||||||| ||||||| || ||| | || Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCA 158501 Query 145147 CAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTA 145206 ||||| || ||| |||||||||| || || ||||| | ||| | |||| | | Sbjct 158502 GCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAA 158561 Query 145207 TCGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAG 145266 | | | | | || ||| || || | ||| |||||| || || | |||||| | Sbjct 158562 TTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGG 158621 Query 145267 AACTAAATTGGCGAGTCGGTGTACGCGCTCCAGCCATAATAGGGGTAGGCA 145317 | || || || || || || || || | |||| ||| || || || |||| Sbjct 158622 AGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551037727016120