Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq1 150 2e-31 >seq1 Length=970878 Score = 150 bits (166), Expect = 2e-31 Identities = 289/418 (69%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 142924 CATCAGGTTATTCAGCTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 142983 |||||| || || ||||| |||||||||||||| || | | |||||| ||||||| || Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 142984 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATA-ATAAG 143042 |||||||||||| || || | |||| | ||||| |||||| || || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 143043 CAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAAT 143102 | || || ||||||||||| | || || || ||||| || || || || || ||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 143103 GTTTCCAGAACGGAATAACACCAGTAT-----GCTTAACTTCGCC-CATACCGATTTTCG 143156 | || ||||||| ||| || |||| |||| || |||| | | || | | Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCAC--CGCCGCGAATCGGGCTGCC 158499 Query 143157 AACCTTCGGCACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATT 143216 | | ||||| || || ||||||||||||| || ||||||| | || ||||| Sbjct 158500 CAGC----GCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATT 158555 Query 143217 CGATGATTGAATTAGCAGTCTTATTAATTGACTTCAGGGAGTCAGCCGC-TTCGATAACC 143275 | |||| | | || || || || | |||| ||| ||||| ||||| | | Sbjct 158556 TCACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGC 158614 Query 143276 ACGCAGGAACTGAACTGTCTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCA 143333 || ||||| |||||||| | || || || | |||| | |||||| ||||| |||| Sbjct 158615 ACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545764546860600