Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq13 150 2e-31 seq1 95.1 1e-14 >seq13 Length=199142 Score = 150 bits (166), Expect = 2e-31 Identities = 137/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061 || || ||||| | ||| ||||| |||||||| || | ||| || || ||||| || || Sbjct 145337 GTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAAACGCACG 145396 Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121 ||||| || ||||| || ||||||||||| ||||| ||||| ||||||| |||||||||| Sbjct 145397 GCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATCT 145456 Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAAC 62174 || | ||||| |||||| || ||||||||||| || ||||||||||| Sbjct 145457 TCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCAAC 145509 >seq1 Length=970878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 230/338 (68%), Gaps = 24/338 (7%) Strand=Plus/Plus Query 136168 TCATCGAGAACAATCTCATCAAACACCTTTGCCGGGTCATTCAGCAGGTTACGCATGATG 136227 |||| | ||| || || ||||| || ||||| || || | | |||||| |||||| Sbjct 156500 TCATTGGTAACGATATCGTCAAAAACTACCGCCGGATCGTTAACAATGTTACGGATGATG 156559 Query 136228 TGAGTATATGAACGAGAGTGAATCGTTTCAGAGAACGTCCAGGTCTGGTTCCATGTATCG 136287 || || || ||||| ||||||||||| || ||||||| |||||| | |||| || || Sbjct 156560 TGGGTGTAAGAACGGGAGTGAATCGTCTCTGAGAACGCCCAGGTTTCAATCCAGGTTTCC 156619 Query 136288 AGTGATGGGTCAGAAATC-AGAGCAGAAAGAACAGC----AGCTGGAGCT-CGGCCTTGG 136341 ||| |||| |||| ||| ||| | |||| | | | ||| ||||| || Sbjct 156620 AGT------TCAGGAATCGAGATCAGCGGCAGCAGCGCGACGTTCGGGCTGCGGCCCTGA 156673 Query 136342 ATTGAATCCAGAAGGCTTTGATATTTCAGATT----ATCAAGGAATACGTTTTGCTGGCC 136397 || |||||||| || | ||||| ||||| || || ||| ||| ||||| | | Sbjct 156674 ATCGAATCCAGCAGCGTCTGATACTTCAGGTTGCTGATAAAG--ATATGTTTTTCATG-- 156729 Query 136398 AACTGGAAGC-TTTTCAAATTGAGCTCGGTC-AGTCATCAGGTTAACTTCTTCAGGACGC 136455 | | || ||| | ||| || || || || | | || || ||||| |||||| Sbjct 156730 ATCCGGCAGCGCCTGGTAATCGA-TGCGATCGCGTGA-AACGTCGACCTCTTCCGGACGC 156787 Query 136456 CAGAAGAACGAGAGTTGTTTCTCAATCAGTTCTTCAAA 136493 |||||||| ||||| || || || ||||| | |||||| Sbjct 156788 CAGAAGAAGGAGAGCTGCTTTTCGATCAGCTTTTCAAA 156825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529557837220000