Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq575 167 3e-36 seq194 140 4e-28 seq476 113 5e-20 seq3 96.9 4e-15 seq326 82.4 9e-11 >seq575 Length=9735 Score = 167 bits (184), Expect = 3e-36 Identities = 559/862 (65%), Gaps = 16/862 (2%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| ||||| || || ||| ||| | | |||||| | || || Sbjct 3018 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 2959 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || |||| ||| || ||| ||||| || | |||||||||||| || ||||| Sbjct 2958 GTGCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCG 2899 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || || ||||||||||| | || | || || || ||| | | ||||| || | | Sbjct 2898 GCGTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 2839 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 || | | | ||| || | | | ||||| || |||||| ||||| || | | Sbjct 2838 CAAAGCTTTTGCGCGGGGATCGTTTTC-TTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 2780 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 | ||| |||||||| || | ||| ||| || || || | | | || ||||| Sbjct 2779 CAAGGCGCGGAACTCCTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 2720 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 |||| ||| | || | |||| || |||| ||||||||| || |||||||| || | Sbjct 2719 GAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGC 2660 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 | |||||||| | | ||| | || || | || ||||| || | || ||||| Sbjct 2659 AAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 2600 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 106939 || | || || |||||||| ||||| || |||| |||| | ||| ||||| Sbjct 2599 TTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGG---GACGCTT 2543 Query 106940 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 ||| |||| | || |||||||| ||| ||| | || || ||||| || | ||| Sbjct 2542 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAAT 2483 Query 106996 ACCATCTGATTGACCATTTGTCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGG 107053 || | || | || ||||| || ||| || ||| | || | | | ||| Sbjct 2482 GCCGTTCGAGTAGCCGTTTGTGCCGGCGATGTAGGAGCCGG--TCGCGCGGATGTTGTGG 2425 Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 107113 ||| || || ||||| || || ||| ||||| |||| ||| | |||| || | Sbjct 2424 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCG 2365 Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173 || || || | || || || ||||| | | || ||||| || || | |||||| Sbjct 2364 TAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 2305 Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233 || || || || |||||||| || || | ||||| | || | | |||||| Sbjct 2304 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATA 2245 Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293 || ||| | || |||||| |||||||| | ||||||||||||| ||| |||||| Sbjct 2244 AGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGC 2185 Query 107294 ATAAACATGTATTG-GGGTGTT 107314 || | ||||| ||| ||| ||| Sbjct 2184 ATGAGCATGTGTTGCGGGCGTT 2163 >seq194 Length=37609 Score = 140 bits (154), Expect = 4e-28 Identities = 282/416 (68%), Gaps = 2/416 (0%) Strand=Plus/Plus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| |||||||| | || ||| ||| || ||||| ||| | || ||| Sbjct 12295 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 12354 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018 |||| ||| ||||||||||| || ||| ||||||||| | ||| | || | || Sbjct 12355 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTACTG 12414 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | ||||||| || ||||||||| | ||||| ||| |||||| ||| ||| | ||||| Sbjct 12415 GATCGTCAAGAACTACCGCGAGGCGTACGGCATGTACGCGTGCAACGGTATCTTGTTCAA 12474 Query 7079 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCA 7137 ||| || || ||| | || ||| ||| ||||||||| | ||||||| || | | || Sbjct 12475 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCG 12533 Query 7138 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 7197 | ||| | ||| || |||| | | | | | || || || | || || | | Sbjct 12534 CCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGTG 12593 Query 7198 ATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAAG 7257 ||||||| ||||| ||||| || || | |||||| ||| | || || | Sbjct 12594 ATTGGGGACACGCCGCCGACTACGTCGAGGGTATGTGGAGGATGATGCAGGAACCCACCG 12653 Query 7258 CCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTGAGGCGGTTCATTGAG 7313 ||||||| | ||| | || |||||||||||||| | || | | |||||| ||| Sbjct 12654 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAGGAGTTCATCGAG 12709 >seq476 Length=13239 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| || ||||| |||| ||| ||| || |||||| ||| | || || Sbjct 5107 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTTGTCGAGACCCCTCAGTC 5166 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018 |||| ||| ||||||||||| || ||| |||||||||| | ||| | || || Sbjct 5167 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 5226 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | ||||||| || ||||||||||| |||| ||| |||||| ||| ||||||||||| Sbjct 5227 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 5286 Query 7079 CCATGAATCACC 7090 ||| || || || Sbjct 5287 CCACGAGTCCCC 5298 >seq3 Length=630259 Score = 96.9 bits (106), Expect = 4e-15 Identities = 279/421 (66%), Gaps = 14/421 (3%) Strand=Plus/Minus Query 9143 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 9202 || ||||| ||| || || |||||| ||| || | || | || ||| |||||||| Sbjct 203167 CAGGATCTGCTCACGACCGCGAACATCTGGCAGGCCAACAACAACCTGACGGTCAAAGCG 203108 Query 9203 ACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAAC 9262 |||||||| || ||||| || |||| ||| || || || |||||||| || | Sbjct 203107 TCCTGGACGCAGCAGCGCAGGGTCCAGGACGTCAGGACGGTTAGTTGCGGCGATAACGAT 203048 Query 9263 AATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTG 9319 ||||||| |||||| || |||||||||||||| || | ||||| | || || Sbjct 203047 AATACCT---TCATTACCTTCGAAACCATCCATCTCAACCAGCATCTGGTTCAGCGTCTG 202991 Query 9320 TTCCCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAA 9378 || ||||| |||| || || || ||| || | || || || || || || | Sbjct 202990 CTCACGTTCGTCATGTCCACCGCCTA-AACCGGCGCCACGCTGACGACCGACTGCGTCGA 202932 Query 9379 TCTCATCAATGAAGACAATACATG--GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCG 9436 ||||||| || |||| || |||| | | |||| ||| ||| || | || || Sbjct 202931 TCTCATCGATAAAGATGATGCATGGAGCCGCTTTT--TTGGCCTGTTCGAACATGTCACG 202874 Query 9437 AACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GA 9495 || | || || ||||| |||||||| || ||||||| | ||| | || | | Sbjct 202873 CACACGGGATGCACCGACACCGACAAACATTTCAACAAAGTCAGAACCGG-AGATGGTAA 202815 Query 9496 TGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTG 9555 ||| || || || | ||| || ||||| ||| || || | || ||||| ||||| | Sbjct 202814 AGAAAGGCACCTTCGCTTCGCCGGCAATCGCTTTTGCCAGCAAGGTTTTACCGGTACCCG 202755 Query 9556 G 9556 | Sbjct 202754 G 202754 >seq326 Length=22253 Score = 82.4 bits (90), Expect = 9e-11 Identities = 227/341 (67%), Gaps = 14/341 (4%) Strand=Plus/Minus Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237 ||| |||||||| ||||| || ||||| | ||| ||| | ||| ||||| || || Sbjct 9922 GATCAGACCCTTAATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCC 9863 Query 169238 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTT 169297 || || || || || ||| |||| || || || ||||||||||||| ||| Sbjct 9862 GTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTT 9803 Query 169298 GAGATCG-TTGAACTCTTGG----TTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACA 169352 ||||| ||||| ||| || | || | | ||| ||| | | || || || || Sbjct 9802 --GATCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGC--CCGCCGCTTCACGCACG 9748 Query 169353 TTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGA 169412 || |||| || || | ||| || || ||||||| || || || ||||| | ||| Sbjct 9747 TTGAGCAACTTTCCTCGCAAAGGGAAAACACCATAGTTGTCTCGACCGACGACAGCCAGA 9688 Query 169413 CCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT--TC 169470 |||| ||| || || | || || ||||| || || || | ||||| || ||||| | Sbjct 9687 CCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGAC 9628 Query 169471 CAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTG 169511 | | | | |||||| || ||||| || || || | |||| Sbjct 9627 CCG--TTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTG 9589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589933830153560