Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=970878 Score = 158 bits (174), Expect = 1e-33 Identities = 288/415 (69%), Gaps = 10/415 (2%) Strand=Plus/Plus Query 141347 CATCAGGTTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 141406 |||||| || || | ||| |||||||||||||| || | | |||||| ||||||| || Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 141407 CTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATA-ATAAG 141465 |||||||||||| || || | |||| | ||||| |||||| | || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 141466 CAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAAT 141525 | || || ||||||||||| | || || || |||||||| || || || || ||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 141526 GTTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AAC 141582 | || ||||||| ||| || ||||| ||||||| ||| ||| | Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACC---GCCGCGAATCGGGCTGC 158498 Query 141583 CTTCAGCACGAATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTGATATATTCGA 141642 | ||||| || || ||||||||||||| || || |||| | || ||||| | Sbjct 158499 CCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCA 158558 Query 141643 TGATTGAATTGGCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGC-TTCGATAACCACA 141701 |||| ||| ||| ||||| || | |||| ||| || || ||||| | |||| Sbjct 158559 CAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGCACA 158617 Query 141702 CAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCA 141756 ||||| |||||||| || || || || | |||| | |||||| || || |||| Sbjct 158618 CAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541540883143800