Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=970878 Score = 98.7 bits (108), Expect = 1e-15 Identities = 205/297 (69%), Gaps = 9/297 (3%) Strand=Plus/Minus Query 154147 CTAGAAGGCATCCGTTTCTACGTATCGTTTGCTTGTTCGTTCGCTTTCGGTGAAAACAAA 154206 || |||| ||||||||||| || || || ||||| ||||| |||| ||| | Sbjct 156324 CTGGAAGCGATCCGTTTCTATGTCAGCTTCGCCTGTTCCTTCGCGTTCGCTGAGCGTGAG 156265 Query 154207 CTGATGGAAGGCAATGCTAAGATCATTTCTCTCATTGCGAGAGATGAATCGCAGCACATG 154266 ||||||||||||||||| || ||||| || ||||| | |||||| ||| |||| || Sbjct 156264 CTGATGGAAGGCAATGCCAAAATCATCAAGCTGATTGCCCGCGATGAAGCGCTGCACCTG 156205 Query 154267 ACCATCACTCAGAACATTCTAAACAAG-TG-GAAGCAG-GGCGATGACCCTGACATGGTT 154323 ||| ||| ||| |||| || ||| | || | ||| | | || || || || ||| Sbjct 156204 ACCGGCACCCAGCACATGCTGAACCTGCTGCGCAGCGGTGAAGACGATCCGGAGATGAAA 156145 Query 154324 GAGATTGCACAAGA-AGAAGAGAAGAACGTCTACGAGATGTTCAATAAA--TGTGTTGAA 154380 |||||||| ||| | | ||||| | || |||| |||| || ||| | || | Sbjct 156144 GAGATTGCGGCAGAGTGCCGTGAAGAGTG-CTTCGAGCTGTTTAAGAAAGCAGCACTGCA 156086 Query 154381 GAAGAAGTAATTTGGGCAGACTACTTGTTCCGTGATGGTTCAATGATTGGTCTGAAC 154437 | |||| | |||||||| || ||||| | | || |||||||| || |||||| Sbjct 156085 GGAGAA--AGAGTGGGCAGAATATCTGTTCAGCGGCGGCTCAATGATCGGCCTGAAC 156031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611647301352200