Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=970878 Score = 96.9 bits (106), Expect = 4e-15 Identities = 187/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 94135 GGTGGCTCAATACCATTGGTGGTATTACACACGACCGAAGATGATTCAGATGGCATCTGT 94194 || ||||||||||| ||||||| ||| | | ||| || | |||||| |||||| | Sbjct 157379 GGAGGCTCAATACCGTTGGTGGCATTGGAGATCTGCGACGAGGTTTCAGACGGCATCAGC 157438 Query 94195 GCAGACAGAGTAGAATTTCGTAGACCGAATACCTTAATCTTCTCACGTAGAACTTCCCAG 94254 |||||||| || || || || || ||| ||||||| ||||| || ||||||| Sbjct 157439 GCAGACAGGGTCGAGTTGCGCAGGCCGTGCGTTTTAATCTCTTCACGCAGGCTTTCCCAG 157498 Query 94255 TCTAGTT--TGTAGTTAGGAGGACAGATACCATCCACATCTTTCTTGTAGTGATCGATAG 94312 || || | | ||| | | | ||| | |||| ||||||||||||| ||||||| Sbjct 157499 TCGAGATGCAGCGGTTCGTTG--CTGATCGCGTCCAGATCTTTCTTGTAGGTGTCGATAG 157556 Query 94313 GAAGTAGACCATCAGAATATTTAGTCTCGTTGAACTTAGAACAAGCTCCCTTCTCTTTGG 94372 | || | || | | ||| | || || |||||| | || || || | |||||| | Sbjct 157557 GCAGAATGCCCTGCGCATAGGTGGTTTCATTGAACCACGGGCAGGCACCTTGCTCTTTCG 157616 Query 94373 CCAAGTTATTAGAAGCTTCCAGTAGATAGTATTG 94406 ||| | ||| || |||| ||| || || || || Sbjct 157617 CCAGCTCATTTGAGGCTTTCAGCAGGTAATACTG 157650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571228119480520