Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-12 >seq3 Length=630259 Score = 89.7 bits (98), Expect = 4e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 |||||||||| | || ||| | || | ||| | ||| || || || || || || Sbjct 451093 GAAAATGAAAAAGACCGCCGAAGATTACCTCGGTGAGCCAGTGACTGAAGCGGTTATTAC 451152 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||||| || || || || || | || ||||| || || ||||| || || ||||| || Sbjct 451153 CGTACCGGCTTACTTCAACGATGCGCAGCGTCAGGCAACCAAAGACGCCGGCCGTATCGC 451212 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 || || | || ||||| || || ||||| |||||||||||||| ||||| || || Sbjct 451213 AGGTCTGGAAGTCAAACGTATCATTAACGAACCGACTGCTGCTGCACTGGCATACGGTCT 451272 Query 550531 TGATAAA 550537 |||||| Sbjct 451273 GGATAAA 451279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028959178555810