Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_016570.1 Length=157304 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=970878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 285/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Plus Query 52470 TTCACCAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCA 52529 |||| |||||||| |||| | ||| | ||| | |||||||| || | || | Sbjct 158246 TTCAGCAGGCGCTGATACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACG 158305 Query 52530 CGGTTCTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGC 52589 ||||| |||| | ||||||||||| || || || | | || | || |||| Sbjct 158306 CGGTTGCCTTCAACACCACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGC 158365 Query 52590 CAGATGGG--AACATAGCATGTTGCCGATCCACCACGGATACCGCCTTGAGAGCAAGACT 52647 || || || | | ||| || || | || ||||| | ||||| ||||| || |||| Sbjct 158366 CACATCGGGTAGAACAGCGTG--GCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACT 158423 Query 52648 TCAGGGCACCAGTC---AAATACTTGATGAATGGAAC-CAGACCTGTATGGACCATTTCC 52703 ||| || ||| |||| |||| ||| || | ||| || ||||||| | ||| Sbjct 158424 TCACCGCG---GTCTGGAAATGCTTGTAGAACGGGATACAG-CCGGTATGGAACGCTTCA 158479 Query 52704 CCTTTACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCA 52763 || || || ||||| || | |||| || || | | || |||||||| ||| Sbjct 158480 CCGCCGCGAATCGGGCTGCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCA 158539 Query 52764 CGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTATCA 52823 || | || ||||| | ||| || | | ||||| || || ||||||| | || Sbjct 158540 CGCTGAGAGACATATTTCACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCG 158599 Query 52824 CCAGTTTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATA 52883 || | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct 158600 CCGCACTCGATCAGCACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATG 158659 Query 52884 ATAGGTGTTGGAAG 52897 || || || || || Sbjct 158660 ATTGGCGTCGGCAG 158673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503204735423360