Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq9 251 2e-62 seq174 107 5e-19 seq2 84.2 5e-12 >seq9 Length=205880 Score = 251 bits (278), Expect = 2e-62 Identities = 482/706 (68%), Gaps = 21/706 (3%) Strand=Plus/Plus Query 32398 GTCATATTCGTCAAGCTGGAAAACCCTTACCGGATAGCGACCACAATCGATGGTTTCGCT 32457 ||||| |||| |||| || || | |||||||| || ||||| ||||| | ||| || Sbjct 168932 GTCATTGTCGTGCAGCTCAAACACACGAACCGGATAACGGCCACAGTCGATCGCTTCACT 168991 Query 32458 TACTGCTATGAAGAAGAA-TCCGTGTGGCTGCCCGGTTACTTTCAGTGC-----GCCTTC 32511 || || || || | ||| | || | |||| | | ||||| ||| || Sbjct 168992 GACCGCAATAAAAACGAACTGCGGATATGTGCCAG------TGCAGTGATAAAAGCCCTC 169045 Query 32512 GCGGTACATTTCTGCCTGGACGTGGTAGCGGAATTCCTCGATGTGACGGGCAAAGCGATC 32571 || |||||| ||||||| |||||||| ||||| | |||||||| ||||||||||| Sbjct 169046 GCAGTACATGGCTGCCTGAACGTGGTACCGGAACGCTTCGATGTGGCGGGCAAAGCGCGA 169105 Query 32572 CATGTCTGCAACCTTTTTCACATCGACGATCACGTTGTGCTCATTCAGCCATTTATCCGG 32631 ||| || ||||||||||| |||||||| | | | | |||| ||||||| || Sbjct 169106 CATATCACTCACCTTTTTCACGTCGACGATGAGAGGGCGATTCGTCAGATATTTATCTGG 169165 Query 32632 ACGGATTCGGCACAGTTCGCCAGTCTCTTCGTCATTCCAGTACATCGACGCTTCACAGTG 32691 ||||| || || ||||| | |||||| | || |||||| | || | ||| ||||| Sbjct 169166 CCGGATGCGACAGAGTTCTTCTGTCTCTGCATCTGACCAGTAGAGGGAGGATTCGCAGTG 169225 Query 32692 ACCTGGTGCTTCCAGCATCCAGCGCGCCGCCGGGTGAGCCATTGCGCTATCGCGCATCAG 32751 || ||||| || | |||| || || | || |||||| |||| || | ||| || Sbjct 169226 GCCGTCAGCTTCAAGAAAAAAGCGTGCGGCGTGATGCGCCATTACGCTCTCTCTCATGAG 169285 Query 32752 TTTCAGCTTCCTGCCATGCTCGGCATCCATCACAGTCA---TACCCATGCCGGCAACATC 32808 | || |||| ||| || || |||||||| || |||| | | |||| | || Sbjct 169286 CTGAAGTTTCCGGCCCTGTTCTGCATCCATGACCGTCATGTTCCGGATGCGTG---TCTC 169342 Query 32809 TTTCAGGAATGCTTCTTCGCCTGTTTTTCCCTGATTTGTGCGGCGGTTGAACTGTGGCGC 32868 ||||| |||||| ||||| ||| ||| |||||| ||||| ||||| || || || Sbjct 169343 ATTCAGAAATGCTGCTTCGTCTGCTTTACCCTGAGAGGTGCGCCGGTTAAAAGAAGGAGC 169402 Query 32869 CACGATGAAACGCTTATCGAATTCATCCGGCTCCAGCAGCAGGCAGTGCAGGGCAGTACC 32928 ||| || || |||||||| || | || ||||| ||||||| ||||||||| || | || Sbjct 169403 CACAATAAAGCGCTTATCAAACTGTTCAGGCTCAAGCAGCATGCAGTGCAGCGCGCTTCC 169462 Query 32929 CATATCCAGCGCGGATTTTTTCTCTTCGTCTTCCGGGGCTGCCTTCACCCATTTCAGAAG 32988 ||||||||| |||| | |||| || || | || || || ||| || Sbjct 169463 CATATCCAGTGCGGCTGTTTTATCCGTATCCACAGGCGCATGTTTGCGCCAGAGGTAAAT 169522 Query 32989 GGAAGGGTTCTTGGCCACCATATCCAGTTGTGACTTACTCACGCCGTCACCGGCGTGGTA 33048 || ||||| || | ||| || || || ||||| |||||| ||||||||| || Sbjct 169523 GGCCGGGTTAACCGCAATGTCATCGAGCTGCGATTTACTGACGCCGGGACCGGCGTGATA 169582 Query 33049 GTCCTCGTTGCTGATGTCGAAATAAATA-CCGGTAT--TCATGCTG 33091 | |||| ||||||| | | ||| ||| ||||| | |||||||| Sbjct 169583 GGCCTCATTGCTGAGGCCTTCATAGATACCCGGTTTCATCATGCTG 169628 Score = 109 bits (120), Expect = 1e-19 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 31585 ACGGCGTTAACCAGTTGTGCTTCATAGCCAAGAGTTCCGTTTACAACGTGCGTCTTCTGT 31644 || || || ||||| ||||| || || || ||| ||||| || | || || || Sbjct 168532 ACTGCATTCACCAGCTGTGCCTCGTATCCCAGAACACCGTTGACGGTGAAGGTTTTTTGG 168591 Query 31645 GCAACAGCGAACGGGTTCATGCCCCATTGCGCCGCCTGCATGGTTACTGCCAGGCAGTCA 31704 || || || ||||| ||||| | ||| ||| ||||||||||| || ||||| ||||| Sbjct 168592 GCGACGGCAAACGGATTCATACGCCACTGCAGGGCCTGCATGGTCACAGCCAGACAGTCT 168651 Query 31705 GACGGC-TTACCTGCAAGATGAGCAGGAACGGTAGCTTTACTGCAGGCCATCAACTCAGC 31763 | |||| || || || ||||| || || || || || | |||| |||||| | || || Sbjct 168652 G-CGGCTTTGCCCGCGAGATGCGCCGGGACAGTGACTCTGCTGCTGGCCATGATTTCTGC 168710 Query 31764 GAAGCGCACCAGTTGATTCATGCCTTCAGGACTGAAGATTGCCGCAG 31810 ||||||||||||| || || | | || || ||||| || | |||| Sbjct 168711 AAAGCGCACCAGTTTATCCAGGGCATCGGGGCTGAAAATAGTGGCAG 168757 >seq174 Length=42168 Score = 107 bits (118), Expect = 5e-19 Identities = 185/267 (69%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 38385 AGTTGGAGCTGGTGCTCGACGAGCAGGAACTGGAAATGCTGGCGCGGAACTGCGCCGCCC 38444 || ||||||||| ||| || ||||||||||| |||||||||| |||||||||||| | Sbjct 40266 AGCTGGAGCTGGCGCTGGATAGTCAGGAACTGGAGATGCTGGCGCAGAACTGCGCCGCAC 40325 Query 38445 GTCGCTATGGTCGTGCGCCGTATGACATGAGCGAGTACATCGCGTTGCTTATTCGGCAGG 38504 | ||| ||||||| |||||||| ||| ||||||||| ||| || | || || ||| Sbjct 40326 GCCGCCCCGGTCGTGAACCGTATGAGCTGAACGAGTACATAGCGCTGTTAATCCGAAAGG 40385 Query 38505 ATGATGCCCGGGTGCGTGGGCGTATCAAGTCAATCAGT--GCTAACCGG---TGCGGTAA 38559 ||| || || | |||| | ||| | || | || ||| | |||||||| Sbjct 40386 ATGCCGC-----TGAGCTGGCGCAGCAACTTAAGATGCTGGCCCACCAGCAGTGCGGTAA 40440 Query 38560 GTGTGGCGATGTATTACCGGTTGAGTCGTGTCCGTGTAACGGTGATTCGCAATGCTGGGT 38619 ||||| ||| | | ||||| |||| || || || | ||||| | ||||||| Sbjct 40441 GTGTGCAGATCTTCTGCCGGTGCAGTCATGCCCTTGCCAGGGTGAAGCAGCGTGCTGGGC 40500 Query 38620 GACGCGTGGCTGGCATGAAACTAAATT 38646 || | || |||||| || ||||| Sbjct 40501 CACAAGCGGTTGGCATAAATTGAAATT 40527 >seq2 Length=722220 Score = 84.2 bits (92), Expect = 5e-12 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2813 TGGTGCGGCATGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCC 2872 |||| || | | ||||||||||||||| | || || ||||||||||| | |||||||||| Sbjct 220888 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 220829 Query 2873 AACTGAGCTAA 2883 ||||||||||| Sbjct 220828 AACTGAGCTAA 220818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123657846817788