Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq9 123 8e-24 seq3 118 3e-22 >seq9 Length=205880 Score = 123 bits (136), Expect = 8e-24 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 23842 CGCCTGGAGGAGATCGACCAGATGGACCTCCTGGACATTGTCAATGATGACCTGACCCTG 23901 |||||| ||||| |||||||||||| | || ||||| | | |||||| || | | Sbjct 7437 CGCCTGATCGAGATTGACCAGATGGACGTGCTCGACATCATGACAGATGACATGCGCATC 7378 Query 23902 CGCCCGCTCAGCCAGTGGCCCAAGGCCTGGCGCCAGTACCTCAGCGGCTTCGACCTGGCC 23961 || | || ||||| | ||||||| ||||| ||||| ||||| ||||| Sbjct 7377 AAACCTGTATCGCAATGGCCAGCCTCATGGCGCCGATACCTGAGCGGATTCGATCTGGCT 7318 Query 23962 GAGATGTTCGAGGGCAAGGGCGACTCCCGCGCGGCGGTCGGCATCCTCAAGAAGATCAAA 24021 |||||||| || ||| |||||| |||| | |||||| ||||| || ||||| || Sbjct 7317 GAGATGTTTGAAGGCCGGGGCGAAGAGCGCGAGATGGTCGGTATCCTGAAAAAGATTAAG 7258 Query 24022 TGGCCGGACAAGGTGAAGAACCTGGAACTGCTCGGC 24057 ||||||||||| || | ||| ||||||||||||||| Sbjct 7257 TGGCCGGACAAAGTCAGGAATCTGGAACTGCTCGGC 7222 >seq3 Length=630259 Score = 118 bits (130), Expect = 3e-22 Identities = 108/134 (81%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 21325 GCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCG-GCCGAACAAGCGACCGATGATGTCGG 21383 |||||||||||| |||||||| ||||||||||| |||| | || || ||| | | |||| Sbjct 42571 GCTGTCGCAGCTTAACCGCTCGCTGGAGCAGCGAGCCG-ATAAACGTCCGGTCAACTCGG 42629 Query 21384 ACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCG 21443 | ||||| || || || ||||||||||||| || ||| |||||||||| | || |||| Sbjct 42630 ATCTGCGTGAATCGGGCTCGATCGAGCAGGATGCGGATTTGATCATGTTTATCTATCGCG 42689 Query 21444 ACGAGGTCTACCAC 21457 | ||||| |||||| Sbjct 42690 ATGAGGTTTACCAC 42703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157098517445866