Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq174 187 9e-43 >seq174 Length=42168 Score = 187 bits (206), Expect = 9e-43 Identities = 258/357 (72%), Gaps = 8/357 (2%) Strand=Plus/Minus Query 3734 GACTGGTGGACCGGTGAAGGTGTCACGGCAAAACGCATTGCTGGCGCTCTGCGCTCCATC 3793 ||||||||| ||||| ||||| | || | ||||||||||||| || || || | Sbjct 18892 GACTGGTGG---GGTGACGGTGTAAGCGCCAGCCGCATTGCTGGCGTGCTTCGTTCACTG 18836 Query 3794 GGCAACGATGTCGATGTGACCGTGAACATCAACAGCCCCGGCGGCGACGTATTCGAAGGC 3853 |||| | |||||| || || | |||||| ||| |||||||| | || || || Sbjct 18835 ---AACGGGGACGATGTCACTGTTTATATCAACTCCCCTGGCGGCGATATGTTTGAGGGA 18779 Query 3854 CTGGCCATTTACAACCTGCTGCGCGAGCACAAGGGCAAGGTCACGGTGAACATCATCGGC 3913 | || || |||||||| || || ||| ||| |||||||| ||||| || || ||||| Sbjct 18778 GTTGCGATCTACAACCTTCTTCGTGAGTACAGCGGCAAGGTGACGGTAAAAATTCTCGGC 18719 Query 3914 CTGGCTGCCTCTGCCGCCTCTTTCATCGCCATGGCGGGGGATGAAATCCGCATCGGCCGC 3973 |||||||| ||||| || || | || || ||||| || |||||||| | ||||| || Sbjct 18718 CTGGCTGCTTCTGCGGCGTCAGTAATTGCGATGGCCGGTGATGAAATTCAGATCGGGCGT 18659 Query 3974 GCCGCCTTCCTGATGATCCATAACGCCTGGCTGATCGCCATGGGTAATCGGAATGATCTC 4033 | |||||||||||||| || ||||||||| | || ||| ||||| |||| ||| || Sbjct 18658 GGTGCCTTCCTGATGATTCACAACGCCTGGATCATGGCCGCAGGTAACAGGAACGATTTC 18599 Query 4034 CGTGAGATA-GCCGATTGGCTGGAGCCATTCGACATGACGCTGGCTGACATTTACGC 4089 || || ||| || || | || ||||| || |||| | |||| || || ||||| Sbjct 18598 CGCGA-ATACGCTGACTATCTTGAGCCTTTTGACAGAGCAATGGCAGATATCTACGC 18543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172742134200308