Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq2 122 6e-23 seq13 102 6e-17 >seq2 Length=722220 Score = 122 bits (134), Expect = 6e-23 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 27053 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTG 27112 |||||| | || ||| || || || |||| || || | ||| || || |||||||| Sbjct 515045 ATTACAGTGACTTAGTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTG 515104 Query 27113 CATTAAATCGAACAGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGAT 27172 ||||| || |||||||| || || || || ||||||| || |||||||| || |||| Sbjct 515105 AGTTAAAGCGCACAGCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGAT 515164 Query 27173 GTTTCTGCGCATCCAAAAGCTGGTCACGGCTTAATACATTAACATTTAGGTGCTGACCAC 27232 ||| | |||||||| ||| |||||| | | || ||||| || ||||||||||| | Sbjct 515165 GTTCCATCGCATCCAGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGC 515224 Query 27233 CTTCGAT 27239 ||||||| Sbjct 515225 CTTCGAT 515231 >seq13 Length=199142 Score = 102 bits (112), Expect = 6e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 27066 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAAC 27125 |||||| ||||| |||| |||||| ||| || ||| | || |||| ||||| || || Sbjct 145336 AGTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAAACGCAC 145395 Query 27126 AGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC 27185 || ||||| || || ||||| |||| ||| ||||| |||||||||||||| ||||| Sbjct 145396 GGCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATC 145455 Query 27186 CAAAAGCTGGTCACGGCTTAATACATTAACATTTAGGTGCTGACCACCTTC 27236 ||| || |||| | || || || || || ||||| |||||||| Sbjct 145456 TTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTC 145506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348177771581726