Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq3 241 4e-59 >seq3 Length=630259 Score = 241 bits (266), Expect = 4e-59 Identities = 250/327 (76%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 25950 CATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTC 26009 |||||||||||| || |||||||| ||||| | ||| |||||||| ||||| ||| | Sbjct 51145 CATCTGCATGGTACCACCAACGTTAACCACGACTTCGGTGGTGTAACGCTCCTGGCCACC 51086 Query 26010 CTTTTCC---CACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTT 26066 || ||| || || ||||| ||| || || || || || ||||| || ||||| || Sbjct 51085 CTGATCCTGCCATTTACGGGTGCGCAGCTGGCCTTCGATATAGACCTGCGATCCTTTTTT 51026 Query 26067 CAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGT 26126 |||||| || ||||||| || || | |||||||||||||| || || ||||| || || Sbjct 51025 CAGGTATTCACCCGCGACTTCAGCCAGTTTGCCAAACAGCACCACACGGTGCCACTCAGT 50966 Query 26127 CACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAAT 26186 | ||||| ||||| ||||||||||| ||| ||||||||| || || || | ||||| Sbjct 50965 GATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTTTCCGACGTAGCCAGCGTAAT 50906 Query 26187 GTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACC 26246 |||||| || ||||| ||||| ||||| ||||| | || ||||| | ||||| || || Sbjct 50905 GTTGGCAACAGCGCCACCATTTGGCATATAACGTACTTCCGGATCCTGACCCAGATTCCC 50846 Query 26247 GACAAGGATTACTTTATTTACGCCGCG 26273 |||||| || ||||| || ||||| || Sbjct 50845 GACAAGAATCACTTTGTTAACGCCACG 50819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159805512695254