Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq1 291 5e-74 >seq1 Length=970878 Score = 291 bits (322), Expect = 5e-74 Identities = 1068/1659 (64%), Gaps = 20/1659 (1%) Strand=Plus/Minus Query 71101 CGTATGAATTACATCAAAGAGTGGTATGATGCAACAAGTACATTTGAGCTATCATTACCA 71160 |||||| |||||||||| | |||||||| | || ||| | | || | || Sbjct 158727 CGTATGGATTACATCAAGCGTTTCTATGATGCGATCTCGACGTTTAAAATCTCCCTGCCG 158668 Query 71161 ACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAGATT 71220 || || || ||| ||| ||||| || |||||| | || || || ||||| ||| Sbjct 158667 ACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGCTGATC 158608 Query 71221 GACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTATGTA 71280 || | ||||| ||||| || || || || ||| | || || ||||||| || ||||| Sbjct 158607 GAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAATATGTC 158548 Query 71281 TCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCTATA 71340 || | ||||| || ||||||||||| | || || ||||| | || || || || Sbjct 158547 TCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGCCCGATT 158488 Query 71341 CGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACAGCA 71400 ||| |||||||| | ||||| || | || || |||| ||||||||||| || || Sbjct 158487 CGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAGACCGCG 158428 Query 71401 GTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCTATG 71460 || || || || |||||||| ||| | ||||| || || || || ||||||||| ||| Sbjct 158427 GTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCTACCCGATG 158368 Query 71461 TGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGATAAC 71520 |||||| | ||| | |||||||| | || |||| || ||| |||||||||| ||| Sbjct 158367 TGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAAGGCAAC 158308 Query 71521 CGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTGATT 71580 || || ||||| | ||||||| ||| || |||| ||||| ||||| || || || | Sbjct 158307 CGCGTGCGTCACATGGACTATGGTGTACAGCTCAACAAGCTGATGTATCAGCGCCTGCTG 158248 Query 71581 ACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCATTC 71640 | ||| | |||| || ||||| || || || || | |||||| ||||| Sbjct 158247 AAAGGCGAAGATATCACCCTGTTCAGCCCGTCTGACGTGCCTGGCCTGTATGACGCATTC 158188 Query 71641 TTTGCCGACCAAGATAAGTTTGAAAAGTTATATACTGAAGCTGA--AGGTAATCCTATGA 71698 || ||| | || ||| ||||||| | ||||| || ||| ||| ||| || Sbjct 158187 TTCGCCAATCAGGATGAGTTTGAGCGCCTCTATACCAAATATGAGCAGG--ATC---AGA 158133 Query 71699 TTATCCAAAAGTCA----GTAAAAGCTAGTGACTTATTTACATTGTTTGCACAAGAGCGA 71754 |||| ||| || || ||||| || | || || || | || || || Sbjct 158132 GCATCCGCAAG-CAGCGTGTTAAAGCGGTCGATCTCTTCTCACTGATGATGCAGGAACGC 158074 Query 71755 GCAGGTACAGGTCGTATCTATCTTCAAAACGTAGATCACTGTAATACCAATAGCCCATTT 71814 || ||| || |||||||| |||| ||||| |||||||| || ||| | ||||| ||| Sbjct 158073 GCCTCTACCGGCCGTATCTACATTCAGAACGTCGATCACTGCAACACCCACAGCCCGTTT 158014 Query 71815 -ATTGCAGAAGTTGCCCCTATTCGTATGAGTAACTTATGCCTTGAAATTGCATTACCAAC 71873 | || | |||| || |||| | |||| | ||||| ||||| || | || || Sbjct 158013 GACCCGAGCA-TTGCGCCGGTTCGCCAGTCTAACCTCTGCCTGGAAATCGCCCTGCCGAC 157955 Query 71874 TGAACCTATGCAGGATATTAATAAGCCTGAAGGTGAAATTGCATTATGTACATTAGCTGC 71933 |||| || | ||| |||| | | ||||| ||||| | ||||| | |||| Sbjct 157954 GAAACCGCTGGAAGATGTTAACGACGAAAACGGTGAGATTGCCCTGTGTACGCTCTCTGC 157895 Query 71934 ATTCAATCTTGGTGCCAT-TAAAGATTTAGGTCG-TATGGAAAAATTATCCGAATTAGTT 71991 ||||| || || ||||| |||| | | || | ||||| | | | | | Sbjct 157894 GTTCAACCTCGGCGCCATCGAAAGCCT--CGACGATCTGGAAGAGCTGGCTACCCTGGCC 157837 Query 71992 ATTAGAGCATTAGATGCTTTACTTGATTACCAAGATTATCCAATACTAGCTGCTGAAAAT 72051 | | || | ||||| | || || || || || || || || | ||||| | | Sbjct 157836 GTACGTGCGCTTGATGCGCTGCTCGACTATCAGGACTACCCGATCCCGGCTGCCCAGCGT 157777 Query 72052 GCTACCAAGCGAAGACGTACTTTAGGTGTTGGCATTATTAATTATGCTCATCACTTAGCT 72111 | | | | | | |||||| | ||| | ||| | || || || || | | | || Sbjct 157776 GGCGCGATGGGTCGTCGTACTCTGGGTATCGGCGTCATCAACTACGCCTACTATCTGGCG 157717 Query 72112 AAAAATGGTGTTAAATATTCTGATGGCAGTGCCAACAATTTAACTCATGAACTCTTCGAA 72171 || ||||||| || || |||||||| ||||| | || || | ||| ||| Sbjct 157716 AAGCATGGTGTGCGCTACTCCGATGGCAGCGCCAATGGCCTGACGCACAAGACCTTTGAA 157657 Query 72172 AGTTTTCAGTATTACCTATTGAAAGCAAGTTGTGATTTAGCCAAAGAACAAGGCGCTTGT 72231 ||||||||||||| ||||||| ||| | || ||||| ||||| || || Sbjct 157656 GCGATTCAGTATTACCTGCTGAAAGCCTCAAATGAGCTGGCGAAAGAGCAAGGTGCCTGC 157597 Query 72232 CCTGCATTCCATGAGACAACTTATTCACAGGGTATATTACCTATTGACCGCTATAATAAG 72291 || ||| |||| || || ||| | ||||| || | ||||| ||| ||| || || Sbjct 157596 CCGTGGTTCAATGAAACCACCTATGCGCAGGGCATTCTGCCTATCGACACCTACAAGAAA 157537 Query 72292 TCAGTAGATGGTATTCATAGTGAAGAGTTACATCTTCCGTGGGAGCAATTGAGAGAAGAT 72351 | || | || | ||| | | ||||| ||||| || | ||||| Sbjct 157536 GATCTGGACGCGATCAGCAACGAACCGCTGCATCTCGACTGGGAAAGCCTGCGTGAAGAG 157477 Query 72352 ATTTTGAAATACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGT 72411 ||| | |||| | || || || || | || | ||||||| |||||| Sbjct 157476 ATTAAAACGCACGGCCTGCGCAACTCGACCCTGTCTGCGCTGATGCCGTCTGAAACCTCG 157417 Query 72412 TCTCAGGTATCTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAA 72471 || ||| | || ||||| || || |||||||| || || |||||| || ||||| ||| Sbjct 157416 TCGCAGATCTCCAATGCCACCAACGGTATTGAGCCTCCGCGCGGTCACATCAGCATCAAA 157357 Query 72472 GCAAGTAAAGATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGAC 72531 || |||||||| ||| || || || || || | || || || | Sbjct 157356 GCGTCAAAAGATGGCATCCTGCGTCAGGTCGTGCCGGAGTATGAGCGTCTGAAAGATCAG 157297 Query 72532 TATGAATTGTTGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATG 72591 || ||| || ||||| | || || | ||| | ||||| | || | || | | ||| Sbjct 157296 TACGAACTGCTGTGGGAAATGCCGAACAACGACGGCTACCTGCAACTGGTGGGTCTGATG 157237 Query 72592 CAAAAGTTTGTCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCA 72651 || || || |||| ||||| || || | ||||| || || || || | ||| | Sbjct 157236 CAGAAATTCATCGACCAGGCGATTTCGTCCAACACCAACTACGATCCGTCGCGCTTCACC 157177 Query 72652 AATGGCAAAGTCCCAGTTAAGCAAATTCTTAAAGATTTAAT-ACGAGGCTATAAGCTTGG 72710 || || ||||| || | || || | || |||||| | | ||| | |||||| | || Sbjct 157176 AACGGTAAAGTGCCGATGAAACAGCTGCTGAAAGATCTGCTGACG-GCGTATAAGTTCGG 157118 Query 72711 TGTTAAAACATTCTATTACCATAACACCCGTGATGGTGC 72749 || ||||| |||| || || ||||||||||| ||||| Sbjct 157117 CGTGAAAACGCTCTACTATCAAAACACCCGTGACGGTGC 157079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335644344529273