Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 9e-13 seq3 89.7 9e-13 >seq4 Length=447486 Score = 89.7 bits (98), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||| | |||||||||| ||||||||||| ||||||| |||||| Sbjct 94501 GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 94560 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| |||||||| ||| Sbjct 94561 AATCCGGCCCCCGCAACCA 94579 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 132964 CGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAATC 133023 ||||||||||||| | |||||||||| ||||||||||| ||||||| |||||||||| Sbjct 94676 CGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATC 94735 Query 133024 CCTCCCCCGCATCCA 133038 | |||||||| ||| Sbjct 94736 CGGCCCCCGCAACCA 94750 >seq3 Length=630259 Score = 89.7 bits (98), Expect = 9e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019 || |||||||||||||| | |||||||||| ||||||||||| ||||||| |||||| Sbjct 207087 GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCA 207146 Query 133020 AATCCCTCCCCCGCATCCA 133038 ||||| |||||||| ||| Sbjct 207147 AATCCGGCCCCCGCAACCA 207165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895695085797480