Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 9e-15 seq9 93.3 9e-15 >seq13 Length=199142 Score = 93.3 bits (102), Expect = 9e-15 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 9793 ATCATGCAGGTGCATGAAAACCATTACATAAAGCGGGCAGGCGTGGCGGGGATACGAGCG 9852 |||||||||||||||||||| | | |||||||||||||||||||| |||| |||||||| Sbjct 157452 ATCATGCAGGTGCATGAAAATCGCTGCATAAAGCGGGCAGGCGTGGTGGGGCTACGAGCG 157393 Query 9853 CGCGCT 9858 |||||| Sbjct 157392 CGCGCT 157387 Score = 80.6 bits (88), Expect = 6e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 34070 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACA 34116 ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 152417 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTACTACA 152371 Score = 80.6 bits (88), Expect = 6e-11 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 37 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACA 83 ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 152417 ATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTACTACA 152371 >seq9 Length=205880 Score = 93.3 bits (102), Expect = 9e-15 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 14453 TTTCAGCAATGCGGGCTACGCGGTATCCCTGAAAGTACAGCAGCATGGCCTGCCTACGGG 14512 ||||||||||||||| | |||||| |||||| |||||||||| | ||||| |||| || Sbjct 26579 TTTCAGCAATGCGGGTGATGCGGTACCCCTGAGAGTACAGCAGTAAAGCCTGGCTACAGG 26638 Query 14513 GATCGAGGTCTGCGGGGGGCAGTGTCGTGTTCATGGCCCAAACATACGGCC 14563 ||||| | || |||||| |||| |||||||| || | |||||||| Sbjct 26639 GATCGCGTTCATCGGGGGCGGATGTCATGTTCATGCAGCACAAATACGGCC 26689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109044552132262