Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq575 125 1e-23 >seq575 Length=9735 Score = 125 bits (138), Expect = 1e-23 Identities = 599/943 (64%), Gaps = 28/943 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || || | | ||||| Sbjct 3306 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTG 3247 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| | || || || Sbjct 3246 AGCTTACGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 3187 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 3186 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTCGATGAC 3128 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||| || ||||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 3127 GGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 3068 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | || | || | || |||| | ||||||| | || ||| |||| |||| Sbjct 3067 GTGCAACTTCT------TAAAGTCGTACACGCCGTCCTTGATGAAGCTC-GGCAACGCGA 3015 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||| ||||| ||| | | | | |||||| ||||||||||||| Sbjct 3014 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 2955 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 ||||||| | ||| ||||| || |||| ||||| || || ||| || | | Sbjct 2954 ACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGT 2895 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 | ||||||||||| | ||| || || || | ||||| | || ||| | ||| | Sbjct 2894 CTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAA 2835 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726 | | || || | | || | ||| | | || ||||| | ||| Sbjct 2834 GCTTTTGCGCGGGGATCGTTTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 2781 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | | || ||| || | ||| |||| || || || || || | ||||| | Sbjct 2780 ACAAGGCGCGGAACTCCTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 2724 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | ||| ||| || ||| | | ||| | || |||||| || || || | ||| | Sbjct 2723 AGAAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGA 2664 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 |||| ||| || || | | | || ||| || ||| ||||| || || | Sbjct 2663 GCGCAAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 2604 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || || |||| ||| |||||||||||||| | |||||| || ||||| || | || Sbjct 2603 GGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 2544 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | || ||||| ||| || || | ||| || | Sbjct 2543 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAA 2484 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | ||||| || || || || || ||||||| || | | |||| | Sbjct 2483 TGCCGTTCGAGTAGCCGTTTGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGA 2424 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 || | || || || |||||| ||||||||| | ||||| Sbjct 2423 TGCTCAAACCGATACCGCCGGCGGTCTTGGAGATGAGCGCGCA 2381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931458638344960