Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq1 145 8e-30 >seq1 Length=970878 Score = 145 bits (160), Expect = 8e-30 Identities = 279/409 (68%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 94855 CCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGGTT 94914 || || || || ||| |||| | ||| || ||||| ||||| || || || |||||| | Sbjct 158670 CCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGCTG 158611 Query 94915 ATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAATTGAATAC 94974 || || |||||| ||| | || || ||| || | | | |||| | |||| Sbjct 158610 ATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAATAT 158551 Query 94975 ATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCTCGT 95034 | ||| | |||||||| || |||||||||| ||| || ||||| || | Sbjct 158550 GTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGCCCG 158491 Query 95035 ATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACT 95094 ||| || || |||| |||||||| ||| || |||| || ||||||||||| Sbjct 158490 ATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAGACC 158431 Query 95095 GCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCT-TATTATCC 95153 || || || || ||||| || || || | ||||||||||| || || ||| | || || Sbjct 158430 GCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCAC-GCTGTTCTACCC 158372 Query 95154 TATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGA 95213 || |||||| ||||| | |||| ||||| || ||||| |||||| ||||| || | Sbjct 158371 GATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAAGG 158312 Query 95214 GAACCGTATTCGCCATATGGACTACGGAATCCAGATGAACGACCTTATG 95262 ||||| | || || |||||||| || | ||| | ||| | || ||| Sbjct 158311 CAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAACAAGCTGATG 158263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537640393696240