Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq33 123 1e-23 >seq33 Length=114970 Score = 123 bits (136), Expect = 1e-23 Identities = 186/260 (72%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 17060 GCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAAC 17119 || |||||| | ||||| ||| |||||||| |||||| |||||| || || || ||| Sbjct 72940 GCCGCTGTGATCCTGCCGCGCTCAGGCCTTGGCCATAAACATGGCATCGTGCTGGGCAAC 72999 Query 17120 CTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGC 17179 ||||||||||||||||| || ||||||||||| |||||| ||| || | ||||| ||| Sbjct 73000 CTGGTGGGTCTGATTGACTCCGACTATCAGGGACAGCTGATGGTCTCGGTCTGGAATCGC 73059 Query 17180 AGCGCTGAACCATACACTGT-CAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGCC 17238 || ||| | | | | || ||| || || || | || ||| |||| | || || Sbjct 73060 GGCCAGGAAAGCTTCTCGCTGCAACCC-GGCGATCGCATGGCACAACTGGTCTTTGTACC 73118 Query 17239 AGTAGTGCAGGCACAGTTTGAGCTGGTTGATGAATTCACTGCTTCAG--AACGTGGAGAC 17296 || |||||||| | ||| | ||||| || || ||| || ||| || || || Sbjct 73119 GGTGGTGCAGGCGGAATTTAACCTGGTCGAAGATTTCGACGC--CAGCCTGCGCGGCGAA 73176 Query 17297 GGCGGATTTGGCCACACCGG 17316 ||||| || |||||| |||| Sbjct 73177 GGCGGCTTCGGCCACTCCGG 73196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238797462579670