Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq4 273 7e-69 >seq4 Length=447486 Score = 273 bits (302), Expect = 7e-69 Identities = 545/800 (68%), Gaps = 18/800 (2%) Strand=Plus/Minus Query 45430 GAAAACTATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAA 45489 ||||| |||||||| ||||| || || ||||| | | | | | ||| | || Sbjct 112244 GAAAA--ATGAAACAGTATCTGGATTTAATGCAACATGTGCTGCACGAAGGCACGCCAAA 112187 Query 45490 AGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTT 45549 || || || || || || || || | || | || || | ||| |||| || || | Sbjct 112186 AGCTGACCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAATCT 112127 Query 45550 GCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGA 45609 |||||| || || ||||| || || || || || | |||||||||||||| ||| |||| Sbjct 112126 GCAGGATGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGA 112067 Query 45610 ACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGAC 45669 ||||| |||||| | ||||||||||| || | | ||| | | || || || | Sbjct 112066 GCTGCTGTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTC 112007 Query 45670 GATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATG 45729 || ||||| |||||||| ||||| || |||||||||||||| | || ||| || || Sbjct 112006 CATCTGGGATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGGCAAACAGTG 111947 Query 45730 GCG--GTCGTGGAAAGGG--GCTGACGGGAAAACGGTCGACCAAATTGCGGC-GGTCTTT 45784 ||| | | |||| || || | | ||| | | ||||| || | | ||| | Sbjct 111946 GCGCAGCTGGGGAACGGCCAGCGGCCAGGAGA----TTGACCAG-TTAAGCCAGGTGATG 111892 Query 45785 AAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCA 45844 || | | |||||| | || |||| || ||| | | || || |||||||| | Sbjct 111891 GAGCAGCTGAAGCGCGATCCCGACTCACGCCGGATTATCGTTTCTGCCTGGAACGTCGGC 111832 Query 45845 AAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTACGC---CTTTCAGTTTTACGTCGCG 45901 || || | || ||| | || | || || || ||| ||| ||||| ||||| ||| Sbjct 111831 GAGCTGAGCGAGATGGCGCTGGCTCCTTGCCA---CGCGTTCTTCCAGTTCTACGTGGCG 111775 Query 45902 AATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCG 45961 | ||| | || ||| | | ||||| || ||| | || || || ||||| Sbjct 111774 GACGGCAAACTCTCCTGCCAGCTCTATCAGCGCTCGTGCGACATCTTCCTGGGCCTGCCG 111715 Query 45962 TTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGAT 46021 ||||||||||| ||||||||| || || ||||||||| || || || ||||| || | Sbjct 111714 TTTAACATCGCCAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGATCTGCAG 111655 Query 46022 GTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAA 46081 || ||||| || | | |||||||| || ||| | |||| || |||||||| || Sbjct 111654 GTGGGCGACTTCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAG 111595 Query 46082 GCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAG 46141 ||| ||||||||||| ||||| ||||| |||||||| || || |||||||| || Sbjct 111594 GCGCGCCTGCAGCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCAAA 111535 Query 46142 CCGCCGTCTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCAC 46201 ||| |||| | ||||||||| | | ||| |||||||| ||| ||||| || ||||| Sbjct 111534 CCGGCGTCGCTGTTTGACTATCAGTTCGAAGATTTTGAGATTGAAGGCTACGATCCGCAT 111475 Query 46202 CCGGCGATTAAGGCTCCTGT 46221 || ||||| || || ||||| Sbjct 111474 CCCGCGATCAAAGCCCCTGT 111455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157738469041466