Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq174 138 3e-28 >seq174 Length=42168 Score = 138 bits (152), Expect = 3e-28 Identities = 224/326 (69%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 44636 ATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAG-AGAA--C 44692 ||||||| | || |||||| |||||| || ||||| |||| || || || | | Sbjct 27132 ATTACCGAGGCAATGCCATTGACTACAAGGCGCAGCGTGACACG---GCAAGCAGCAGCC 27076 Query 44693 TGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGC 44752 | |||||||| || | | || ||| | ||||||| | | ||||||||||| | |||| Sbjct 27075 TAAAGCTGGCTAATGACACCATCACTTATATGCAGACGAGACAGCGTGATGTGGACGCGC 27016 Query 44753 TCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATGCTCTGCGTG 44812 | ||||| |||||||| |||||| | || ||||| |||||| | |||| |||| | Sbjct 27015 TTGATGCGAAATACACCAAGGAGCTGGCAGATGCCAAAGCTAAGCTTGATTCTCTTCAGC 26956 Query 44813 ATNNNNNNNNNNNNNNNNNNNNNNGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTG 44872 | || ||| | |||| ||| |||| | | || || Sbjct 26955 AGTGCGTTAGTTCTGGTAAATGCGGGCTGCGCCTCAACGCAATCTGCCCGAAAG---GTA 26899 Query 44873 AAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTG 44932 | ||| || | || ||||||||||| |||||||| | ||||||| | ||| ||||| Sbjct 26898 ACGCCTCCGGCACCACCGGCGTGGATGATGCAGCCAGCGCCCGACTTACTGACGCCGCTC 26839 Query 44933 AACGGGATTATTTCACCCTCAGAGAG 44958 |||||||||||||||||||||||||| Sbjct 26838 AACGGGATTATTTCACCCTCAGAGAG 26813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151188564460500