Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq174 143 8e-30 >seq174 Length=42168 Score = 143 bits (158), Expect = 8e-30 Identities = 219/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 38649 GATCCGGAGTCGCCGGAGTCTTTTATGTTACGCCCAAAACGTCGCCGCTGGGTTAATGAA 38708 || ||||| || || || || || ||| ||||| || ||| ||||||| | ||| Sbjct 29515 GACCCGGAATCACCAGAATCATTCATGAAGCGCCCCAAGCGTAAGCGCTGGGAAAGTGAG 29456 Query 38709 AAGTACACGCGCTGGGTTAAGACACAGCCGTGTGCATGTTGTGGAAAGCCCGCTGATGAT 38768 || || || | ||||| || | ||| |||| |||||||| || || ||||| ||| Sbjct 29455 AAATATACAAGATGGGTAAAATCGCAGACGTGCGCATGTTGCGGCGTGCAGGCTGACGAT 29396 Query 38769 CCCCACCACCTGATAGGTCACGGTCAGGGTGGAATGGGAACAAAAGCGCATGACCTTTTT 38828 || || ||| | || || || || ||||| ||||||||||| || |||||||| | ||| Sbjct 29395 CCTCATCACATCATCGGACATGGACAGGGGGGAATGGGAACGAAGGCGCATGATTTATTT 29336 Query 38829 GTGTTGCCTTTGTGCAGAAAGCATCACGACGAGCTGCATGCGGATACCGTGGCATTTGAA 38888 ||| | || | |||||| ||||||||| || ||||| ||||| || |||||| Sbjct 29335 GTGATACCGCTATGCAGAGCGCATCACGATGAACTGCACCGGGATATGAGAGCGTTTGAA 29276 Query 38889 GAGAAGTATGGCTCCCAGCTGGAGCTGATATTTCGTTTTATCGATCGTGCGCTGGCAATT 38948 | ||| || ||| ||| | |||||| | || | || |||||| ||| | ||| | Sbjct 29275 GCGAAATACGGCAGTCAGATAGAGCTGCTGTTCAGGTTCCTCGATCACGCGATTGCAGTC 29216 Query 38949 GGCGT-ATTGG 38958 || || ||||| Sbjct 29215 GGAGTGATTGG 29205 Score = 105 bits (116), Expect = 2e-18 Identities = 248/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 32525 AACCACAGGAACAGGAGGTAAGCCGTGGGTAAGCATCACTGGAAAGTGGAAAAACAACCT 32584 |||||||| || | | | | |||||| | || | |||||| |||| ||||| ||||| Sbjct 34721 AACCACAGTAAAGAGGGCTTAACCGTGGATCAGAAGCACTGGCAAGTAGAAAAGCAACCA 34662 Query 32585 GAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCATTGCCTGGGGGTTACGCTGAA 32644 | ||| ||| || | | ||| || ||| | | || || || || || ||| Sbjct 34661 GCATGGCTGGTGGCGGCAATTAAAAAGACCATCTCAAGTCTTCCGGGTGGGTATGCAGAA 34602 Query 32645 GCTGCTGACTGGCTGGATGTAACAGAGAACGCTTTATTCAACCGCCTTCGTGCAGATGGC 32704 || ||||| ||| ||| || || || | || || |||||||| |||||| | ||||| Sbjct 34601 GCAGCTGAATGGTTGGGCGTGACTGAAGATGCATTGTTCAACCGTCTTCGTACCAATGGC 34542 Query 32705 GATCAGATTTTCCCGCTGGGATGGGCAATGGTTTTACAGCGCGCGGCTGGCACTCACTAC 32764 |||||||||||||| |||| ||||| ||||| | || | || | ||| | || Sbjct 34541 GATCAGATTTTCCCAATGGGCTGGGCGATGGTCCTGCAACAGGCAAGCGACACCAAGCAC 34482 Query 32765 ATTGCGGATGC--TGTCGC-ACAGTCTGCCGGTGGGGTGTTCGTATCGCTTCCTGAAATT 32821 || || | || |||| | ||||| | | || ||| ||||| | ||| Sbjct 34481 ATCGCTAACGCGGTGTCCCTTCAGTCAAAC---AGCGTCAACGTTCCGCTTGTGGGCATT 34425 Query 32822 GAGGAAGTAGAGAACGCCGATATAAACCAGCGCCTGCTGGAAGTCA-TCGAACAGATCGG 32880 ||||| || || ||||| ||||| || ||||| ||| ||| ||||| | || |||||| Sbjct 34424 GAGGATGTTGATAACGCAGATATCAATCAGCGACTGATGG-AGTCAGTTGAGTGGATCGG 34366 Query 32881 GAATTACTC 32889 || |||| Sbjct 34365 TAAGCACTC 34357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142299636797616