Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq174 387 4e-103 >seq174 Length=42168 Score = 387 bits (428), Expect = 4e-103 Identities = 908/1360 (67%), Gaps = 39/1360 (3%) Strand=Plus/Minus Query 8375 GGGTGAAAATATGGCTACGTTGCGCGAACTGATCATCAAAATATCTGCAAACTCTCAG-T 8433 ||||||||| ||||||||| |||||||||| || || ||||| ||||| ||||| ||| | Sbjct 14165 GGGTGAAAA-ATGGCTACGCTGCGCGAACTCATTATTAAAATTTCTGCCAACTC-CAGCT 14108 Query 8434 CATTCCAGTCTGAAATTTCTCGTGCTTCAAGAATGGGGAATGACTATTACCGGGTAATGC 8493 | || ||| ||| ||| | || || || | ||||| |||||||||||| ||| Sbjct 14107 CTTTTCAGAGTGAGATTGCCCGGGCCTCGCGCATGGGTGCAGACTATTACCGGACTATGG 14048 Query 8494 AGACTGGAGGACGCCAATCGGCCGCAGCTTCGCGTGAAACTCAGCGTGCCTT---GG--C 8548 || ||||| ||| | | || ||||| ||||||||| ||||| || | || | Sbjct 14047 AGCAGGGAGGCCGCAAGGCCGCTGCAGCGGCGCGTGAAAGCCAGCGGGCGATTCAGGACC 13988 Query 8549 TGAG---GTAACTAGTCAAATAAACACCGCGAAGGCCTCAGCACTGGGAATGGCTGGTGC 8605 |||| | | || || || || | || | | || |||| ||| | || | Sbjct 13987 TGAGTGAGCAGCTTGT---AT-----CCACTAAAGAGACGGCGCTGGAGATGACCGGCGT 13936 Query 8606 ATTTNNNNNNNNNNNNNNCACTGGACATCTTATATCTCTTGCGGATGAATGGAGCTCAGT 8665 || | | || || || | ||||| | |||| | || Sbjct 13935 CTTCGCCGGCGCATTTGCCGCGGGCAGCCTGATTGAGATGGCGGACAACTGGAATGCCGT 13876 Query 8666 AAATGCCCGTCTGAAGCAGGCCACGCAGTCCAGCGATGATTTCCAGGCATCACAGCGCG- 8724 || ||||| || |||||||| | ||||||| | || ||| | ||| | || Sbjct 13875 GAACGCCCGCCTTAAGCAGGCTTCTCAGTCCACAGGCGAGTTC-----AGCACGGTGCAG 13821 Query 8725 -AAT---TAATGGCGATCAGCCAGAGAACGGGTACTGCTTTTGCTGATAACGCCAGTCTT 8780 ||| | |||| ||||||||| | || ||||| | |||| || || || | |||| Sbjct 13820 AAATCGCTGATGGATATCAGCCAGCGTACCGGTACGGTATTTGGCGACAATGCGAATCTT 13761 Query 8781 TTTGCACGTTCGGCTTCTTCCATGCGGGAATATGGTTACAGGTCTG---AGGAAGTACTG 8837 | ||| ||||| ||| ||||||||||||||| || ||| |||| |||| || || Sbjct 13760 TATGCGCGTTCCGCTGCTTCCATGCGGGAATTCGGATAC---TCTGCGCAGGATGTGCTC 13704 Query 8838 AAAGTTACCGAGGCCATTTCTACAGGATTGAAATTGTCCGGAGCCAGTTCTGCGGAAGCC 8897 || ||||||||||| | || ||||| | || |||| || || ||||||| ||| | Sbjct 13703 AAGGTTACCGAGGCAGTATCAACAGGGCTTAAGCTGTCAGGCGCGAGTTCTGAAGAAAGC 13644 Query 8898 AGCTCGGTGATCACTCAGTTCAGCCAGGCACTGGCGCAAGGGGTTCTGCGCGGTGAAGAG 8957 ||||| || ||||| |||||||||||||| |||||||| || || || || ||||| ||| Sbjct 13643 AGCTCTGTTATCACCCAGTTCAGCCAGGCGCTGGCGCAGGGCGTGCTTCGTGGTGAGGAG 13584 Query 8958 TTTAATTCAGTAAATGAAAGCGGTGATCGTGTTATTCGTGCTCTGGCTGCAGGAATGGGG 9017 || || |||| || || |||||||| ||||| ||||||||||| || || ||||| Sbjct 13583 TTCAACGCAGTTAACGAGGCGGGTGATCGCGTTATCCGTGCTCTGGCCGCTGGTATGGGC 13524 Query 9018 GTTGCCCGTAAAGATCTGAAGGCAATGGCGGATGATGGAAAGCTGACCGCCGATAAGGTT 9077 |||||||| ||||| || ||||| ||||| ||| | || | |||||| ||||| || Sbjct 13523 GTTGCCCGCAAAGACCTTAAGGCGATGGCCGATCAGGGCCAACTGACCATTGATAAAGTG 13464 Query 9078 GTTCCTGCACTGATTAGTCAGCTTGGTACGCTGCGGGATGAATATGCAGCCATGCCTGAT 9137 || || || |||| || ||||||| || ||| ||| ||| | | | | |||| || Sbjct 13463 GTGCCAGCCCTGACCAGCCAGCTTGATAAGCTCAGGGGTGAGTTTTCCTCACTGCCGGAC 13404 Query 9138 ACCGTATCATCCTCTGCAACCAAAGTTGAAAACGCCTTTATGGCCTGGGTTGGTGGTGCG 9197 | || || |||| ||||| ||| | ||||||||| |||||||| | || Sbjct 13403 TCGGTGTCGGGTTCTGTTACCAAGGTTCAGAACGCCTTTGAACAGTGGGTTGGCGAGGCA 13344 Query 9198 AATGATGCCAGCGGTGCAACAAAAACGCTTACCGGAATAATGAATGGTGTTGCGAATAAT 9257 || ||| || |||||| || ||| |||| | || ||| | | || || Sbjct 13343 AACAGTGCGTCGGGCGCAACATCCACCCTTTCCGGGGTTCTGGTTGGCGCATCTAAAAAC 13284 Query 9258 ATTGATACGGTTGCCACGGCGGCGGGAGCTCTGGTTGCAATTGGTGTAGCCCGATATTTT 9317 || || ||| | ||||| | | || || ||||| || || |||| || | | || Sbjct 13283 ATAGACACGATCGCCACCGTTACCGGCGCACTGGTGGCCATCGGTGCTGCAAGGTTCTTC 13224 Query 9318 GGCAATATGGCGTCTTCTGCGGGCTCTGCAACTGCCGGGTTAATCACTGCTGCCAGAAAC 9377 || ||||| || ||||| |||| | | || | | ||||| | || | Sbjct 13223 GGGGGCATGGCATCCGGTGCGGTTGCTGCCTCAACGGGCGTTTTTACTGCGTATAAAAGC 13164 Query 9378 GAAGTGGCTCTTGCTGAGGCACAGCTCAGAGGGACACAGATAGCAACAGCCAGAGCGCGG 9437 || || || | | |||| ||| | | || |||||||| | ||||| | || || Sbjct 13163 GAGGTCGCCTTAACCCAGGCGCAGATTCGCGGTACACAGATTTCCACAGCGCGTGCCCGC 13104 Query 9438 GCGGCATTGTATCGTGCGCAGCAGGCGGTTATGGCTGCCCGTGGTACAGAAAAACAGGCT 9497 || ||| | ||||| || ||||||||| || ||| || || || |||| | |||| Sbjct 13103 GCAGCAGTCTATCGCGCACAGCAGGCGCTTGCGGCCGCACGGGGAACAGCCACGCAGGAG 13044 Query 9498 GCAGCAGAAGCG-AAACTGGCAACCGCACAGGCTTCACTTACCCGTAATATTGCTGCCAG 9556 || || | |||| || || |||| ||| | | || ||||| ||||| | ||| | Sbjct 13043 GCTGCTG-AGCGCCGTCTTGCTGCCGCGCAGCTTGCTCTCACCCGAAATATGACGGCCCG 12985 Query 9557 AACAGCGGCACAGGCAACG-CTGAATAACGTTACGTCAGTTAGTAGTCGGTTGTTAAGCG 9615 || || ||||||| | || || || | | | || || ||| | || || |||| Sbjct 12984 TACCGCCGCACAGG-AGCGCCTCAACAGCATCACCTCCGTTGGATCGCGACTGACGAGCG 12926 Query 9616 GTGCTCTGGGGCTGGTTGGTGGTGTGCCTGGACTTGTCATGCTGGGGGCGGCGGCCTGGT 9675 ||| || || |||||||| || | || || || |||||||| || || | ||||||| Sbjct 12925 GTGTACTCGGTCTGGTTGGGGGCATTCCCGGCCTGGTCATGCTCGGAGCCGGAGCCTGGT 12866 Query 9676 ACACAATGTATCAGAACCAGGAGCAGGCCAGAGAATCAGC 9715 |||| ||||||||| ||||||||||| || ||||| || Sbjct 12865 ACACCATGTATCAGCGTCAGGAGCAGGCAAGGGAATCGGC 12826 Score = 152 bits (168), Expect = 1e-32 Identities = 972/1535 (63%), Gaps = 79/1535 (5%) Strand=Plus/Minus Query 14487 ACTCCAACTGAACAGCCCGATGATCTGCAGTCAGTTGCGAAGGCGAAAATTTTAATCGCC 14546 ||||| ||||||||| |||||||||| ||| | || || ||||| | | || Sbjct 7770 ACTCCGGTTGAACAGCCAGATGATCTGCTGTCTATCGCAAAATTAAAAATGCTGCTGGCT 7711 Query 14547 CTTGGCGAGGGCGAGTTCTCCGGGCAATT-AACCGGCAAAGATATCTACCTGGACGGAAC 14605 | ||||| ||| | || ||| ||| ||||| || | || |||||| ||| || Sbjct 7710 ATATCAGAGGGTGAGAT-TCAGGGTGATTTAACCGCGCAACAGATTTACCTGAACGACAC 7652 Query 14606 AGCGCTGGAGAACGCCGACGGCTCCCAAAACTTCAGCGGCGTTACGTGGGAATTTCGCGC 14665 ||| ||||| |||||| || | ||||||| |||||| |||||| | || Sbjct 7651 CCAATTGGCGAACGAAGACGGCACCTACAACTTCACCGGCGTAGTGTGGGACTGGCGTAA 7592 Query 14666 GGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAGCGT 14725 || ||||||| || | |||||||||||||| || | ||| || ||| | || Sbjct 7591 AGGTACGCAGGACCAGACCTATATTCAGGGTATGCCTGAAGTCGATAATGAGCTTTCTGT 7532 Query 14726 AGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCTTTC 14785 || || ||| | || | |||||||| ||| |||||||||| | || Sbjct 7531 TGGGGTTGCAGTAACGCAGGCAATCGCCTGGACCCGCCAGTTTACCAATCTGACACTGGA 7472 Query 14786 AGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTTCAAACAGGA---AGACGACGGCGA 14842 || |||||| | || | | ||| | || | ||| | |||| | ||||| Sbjct 7471 TGCCGTTCGCATTAAGCTGAGCTTGCC---GGTTCAGTATCAGTATAAAGACAATGGCGA 7415 Query 14843 TCTGGTGGGTTACTCGGTCA---ATTATGCGATTGACCTGCAGACTGACGGCGGCACATG 14899 | |||| ||| | || | | ||||| ||||| || |||||||| || |||| Sbjct 7414 TATGGTCGGTACC---GTAACGCAGTATGCCATTGATCTCTCAACTGACGGTGGTTCATG 7358 Query 14900 GCAGACGGTACTCAATACCAGCGTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGCCA 14959 | ||||| | | || | ||| ||||| ||||||| ||| ||||| || Sbjct 7357 GGTCACGGTGGTGGACGGAAGGTTTGACGGTAAAACTACGTCTGAATATCAGCGCGATCA 7298 Query 14960 CCGTATCGATTTACCGCAGGCTGGCAGCAC-CTGGACAATACGTCTGCGTAAGATTACCT 15018 || ||||| ||||| | || || | |||| || | | |||||| |||||| Sbjct 7297 TCGCATCGACTTACCTAAAGCCA-CATCTGGCTGGTCAGTCAGGGTGCGTAGAATTACCG 7239 Query 15019 CTGACGCCAACAGCG-CGAAGATCGGCGACACGATGATGCTGCAGAGCTTCACCGAGGTG 15077 |||| || || | | ||| | || | | | | ||| | ||||| Sbjct 7238 CTGATTCCT-CATCATCAAAGCTTATTAACGCTTTCAAAGTTTTTTCGTTCGCAGAGGTC 7180 Query 15078 ATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTCGACTCAAGC 15137 || ||| ||||||||||||||| || ||||||||||| || |||| | || | || Sbjct 7179 ATCGACAGCAAACTGCGCTACCCCAATACCGCGCTGCTGTATATCGAGGTTGATGCCAGT 7120 Query 15138 CAGTTCAACGGCTCTATTCCTCAAATTTCA--TGCGAACC----GCGCGGCCGCGTTATC 15191 ||||||| ||| || | | |||| | | ||| | || | ||||| | ||| Sbjct 7119 CAGTTCAGCGG-TC-AGGCACCAAAAGTAACGTGCAAGCCAAAAGGGCGGCTG-GTT--- 7066 Query 15192 CGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCG 15251 ||||| || ||||| || |||| | || | |||| ||| || ||| |||| Sbjct 7065 CGCGTGCCGACAACCTATGATCCTGTTTCACGTAGTTATGCCGGAACGTGGCAGGGTGAT 7006 Query 15252 TTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGAC 15311 || || | || | || |||||||| || |||||||| || |||||||| | | | Sbjct 7005 TTCAAATACGCCTATACCGATAACCCGGCATGGATTTTCTATGACCTGGTGCTGGATAAA 6946 Query 15312 CGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGA--AT-ATTGATAAATGGACGCTTTAT 15368 || || | ||| ||| | || ||| | || || || || ||| |||||| Sbjct 6945 ATATTTGGTATGGGGACGCGTGT---CGATGCCACCATGATCGACAAGTGGGAGCTTTA- 6890 Query 15369 CAGG-TTGCTCAGTATTGTGATCAGATGGTGCCAGACGGCAAAGGGGGCAACGGTACAGA 15427 ||| || | ||||| || |||||||||||| | |||||| ||| || ||||| | Sbjct 6889 CAGTATTTCGCAGTACTGCGATCAGATGGTGTCTGACGGCGCAGGCGG-AACGG-----A 6836 Query 15428 ACCACGTTATACCTGCAACGTGTACATCCAGGATCGGAACGACGCCTACACAGTCCTGCG 15487 || || | |||||| ||||||| ||| ||| || | | || || || || || ||| Sbjct 6835 GCCGCGCTTTACCTGTAACGTGTTCATACAGAGTCAGCAGGATGCGTATACCGTTCTGAA 6776 Query 15488 TGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCT 15547 || |||| || || ||||||||||| || | ||||||| |||||| | | | Sbjct 6775 GGACATTGCGGCGATATTCCGTGGCATTACGTTCTGGGGCAACAGCCAGATTTTCGTCAA 6716 Query 15548 GGCTGACATGCCGC---------------GC------GATGTTGATTACAGCTA-TACGC 15585 |||||| |||||| || |||||||||| | || |||| Sbjct 6715 TGCTGACGTGCCGCAGGTTGACTCTGACGGCAACGTTGATGTTGATTTCGTTTACCACGC 6656 Query 15586 GCGCTAACGTTGTTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACA 15645 ||| ||||| ||| || ||||||||| || || ||| | |||| ||||||| Sbjct 6655 -CGCAAACGTCATTGATGGGTTGTTCACCTATGCGGGCGGCAGCTACAAAAATCGCTACA 6597 Query 15646 CCACAGCGCTGGTTTCA--TGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCC 15703 || || | | | || ||||| || ||| |||| |||| | ||| | | ||| Sbjct 6596 CCTCATGCCAG--TCCAGCTGGTCCGATCCGATTAACCATTATTCGGACACCGTAGAGGG 6539 Query 15704 GGTATTTGAGCAGGCGCTGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCAT 15763 || | || | ||||| ||| |||||| | | | || | || || || Sbjct 6538 CGTTTACGATTCCGATCTGGTACAGCGCTACGGCGTTAGGGAAATGAGCCTCACGGCTAT 6479 Query 15764 CGGCTGCACCAGGCAGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCTCACCAATAA 15823 ||||||||| ||| ||||| | || |||||||||| |||||| ||||| Sbjct 6478 CGGCTGCACGTCACAGAGCGAGGCACATCGGCGCGGGCGCTGGGCCATTCTCTCCAATGC 6419 Query 15824 CAAGGATCGCGTTGTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCT- 15882 ||| ||| | ||||| || | ||||| ||||| || | ||||| | || ||| Sbjct 6418 CAAAGATGGTACGGTTTCATTCGGCGTCGGACTGGATGGTTATATTCC-TATCCCCGCTG 6360 Query 15883 ACATCATCGCCGTGGCAGACGAGCTGCTTTCCGGAAAGGTTATGGGCGGCCGCATCAGCG 15942 | ||||||| ||||| ||| | | ||| ||| | |||||||||||||| Sbjct 6359 AAATCATCGGTGTGGCGGACCCATTCCGAAGCGGGAAGCAGAACGGCGGCCGCATCAGTT 6300 Query 15943 CCGTTAACGG---TCGCGTTATCAAACTTGACCGC 15974 | ||||| || |||||| | ||| |||||| Sbjct 6299 CTGTTAATGGCCTGCGCGTT---ACACTCGACCGC 6268 Score = 96.9 bits (106), Expect = 9e-16 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 6056 GGCGTCCATATTCGTGGCGTTAACCCGCGC-ACCGGAAACAGCGATAACACGATGAAGGC 6114 ||||| |||||||||||| || || ||| | ||| ||||| || | ||||||||| | Sbjct 16043 GGCGTGCATATTCGTGGCAGAAATCC-CGCTAACGGCAACAGTGACACCACGATGAAAAC 15985 Query 6115 TAATAACCCGAGAAACGCCTTTTACTGGCGATTCGTTGAGCTGGGTACCGCGAACATGCC 6174 ||| |||| || |||||||||||||| || | ||| |||||| | || ||||| Sbjct 15984 GAATTCTCCGAACAATGCCTTTTACTGGCGTTTTCTGGAGGAGGGTACATCAAAGATGCC 15925 Query 6175 TGCACATCCGTTTGTGCGACCCGCTTACGATA 6206 ||| ||||| ||||| || || || | ||||| Sbjct 15924 TGCTCATCCTTTTGTCCGGCCAGCATTCGATA 15893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128364690803426