Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq4 205 1e-47 >seq4 Length=447486 Score = 205 bits (226), Expect = 1e-47 Identities = 225/297 (76%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGA-AAAAGCAGA 122421 |||||||| |||||||| ||| ||| | || | || | || |||| |||||| || Sbjct 112239 ATGAAACAGTATCTGGATTTAATGCAACATGTGCTGCACGAAGG-CACGCCAAAAGCTGA 112181 Query 122422 CCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAA 122481 |||||| ||||| || || || || | || || || ||||| || | ||||| | Sbjct 112180 CCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAATCTGCAGGA 112121 Query 122482 AGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCT 122541 ||||| ||||||||||| ||||| || ||| ||||||| || || |||||||| || Sbjct 112120 TGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGAGCTGCT 112061 Query 122542 GTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 122601 |||||| || | ||||||||||||||| ||||| ||||| ||||||||| ||||| Sbjct 112060 GTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTCCATCTG 112001 Query 122602 GGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||| ||||| ||||| |||| |||||||||||||||| || || || ||||| Sbjct 112000 GGATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGGCAAACAGTGGCG 111944 Score = 149 bits (164), Expect = 1e-30 Identities = 226/319 (71%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 123074 TCCTGTCAGCTGTATCAGCGCA-GTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGC 123132 ||||| ||||| ||||||||| |||| ||||| ||||| ||| | ||||||||||| || Sbjct 111762 TCCTGCCAGCTCTATCAGCGCTCGTGC-GACATCTTCCTGGGCCTGCCGTTTAACATCGC 111704 Query 123133 CTCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTT 123192 | || ||| | ||| |||| ||| | || |||||| | || || || || ||||| Sbjct 111703 CAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGATCTGCAGGTGGGCGACTT 111644 Query 123193 CGTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGGCAGATTTGCA 123252 ||| ||||| || || ||| || || ||| ||||| ||||||||||| |||| Sbjct 111643 CGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGCGCGCCTGCA 111584 Query 123253 GTTAACTCGCGAACCTCATCCGTTACCACAACTGCGGATTAAACGTCGTCCGGATTCTAT 123312 | | || |||||||| | |||| | ||| ||| || ||||| |||| || | Sbjct 111583 GCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCAAACCGGCGTCGCT 111524 Query 123313 CTTCGACTATAAGTTTGAAGATTTCGAAGTGGTCGGATACGAATCGCATGACGCTATTAA 123372 || |||||| |||| |||||||| || | | || ||||| ||||| ||| || || Sbjct 111523 GTTTGACTATCAGTTCGAAGATTTTGAGATTGAAGGCTACGATCCGCATCCCGCGATCAA 111464 Query 123373 GGCACCGGTGGCGATATGA 123391 || || || || || ||| Sbjct 111463 AGCCCCTGTCGCCATCTGA 111445 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 122789 ATCGACCAAATCAGCAAGGTCATGGAACAACTGAAAAACGACCCGGACAACCGCCGTATC 122848 || ||||| | ||| |||| ||||| || ||||| ||| || ||| ||||| || Sbjct 111915 ATTGACCAGTTAAGCCAGGTGATGGAGCAGCTGAAGCGCGATCCCGACTCACGCCGGATT 111856 Query 122849 ATCGTCAGTGCCTGGAACGTGGCTGACCTGGATGAAATGGCGTTAGCACCATGCCATGCC 122908 ||||| |||||||||||| | || ||| || |||||| | || || ||||| || Sbjct 111855 ATCGTTTCTGCCTGGAACGTCGGCGAGCTGAGCGAGATGGCGCTGGCTCCTTGCCACGCG 111796 Query 122909 TTCTTCCAGTTCTAC 122923 ||||||||||||||| Sbjct 111795 TTCTTCCAGTTCTAC 111781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777570090772400