Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq8 129 6e-25 >seq8 Length=238926 Score = 129 bits (142), Expect = 6e-25 Identities = 508/785 (65%), Gaps = 33/785 (4%) Strand=Plus/Plus Query 38636 GCAATTTCTTCCAAGCACGCAATCTTCAATCCTTGACAGTTCTCAATAGTCTGCACGAAT 38695 ||||| ||||||| ||| ||||| || || || |||| || || | |||||||| || Sbjct 61188 GCAATCTCTTCCAGGCAGGCAATTTTAAAGCCCTGACGTTTTTCCACCGTCTGCACAAAC 61247 Query 38696 TGACCAGCTTCCATCAGACTGGCGTGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTCCG 38755 | ||||||| ||| ||| |||| || || || || ||||| | ||| |||||||| Sbjct 61248 ATGCTGGCTTCCACCAGGCTGTCGTGCGTGCCGGTATCCAGCCAGGCAAAACCTCGTCCC 61307 Query 38756 AGAACTTCCACTTGTAACTTCCTGTCTTCTAGGTAGCTGCGATTGATATCAGTGATCTCC 38815 || | ||| || | || | || || || | | || || | ||||| ||| Sbjct 61308 AGCAGTTCGACCGTCAGCTCACCACGCTCCAGATACATCTGGTTAATGGCCGTGATTTCC 61367 Query 38816 AGTTCTCCACGCGCGGAAGGGGTTACTTCTAATGCACG--TTGAATAACAGAGTTATCAT 38873 || || || ||||| || ||||| | || | | || || |||||| || |||| Sbjct 61368 AGCTCGCCCCGCGCTGA--GGGTTTCACCTGTTTCGCGAATTCAATAACCTGATTGTCAT 61425 Query 38874 AGAAATACAAACCTGTGACAGCATAATCTGATTTAGGATTTTCAGGTTTCTCTTCAATAG 38933 | ||||| | || || || || | ||||| || | | |||||||||||||| | Sbjct 61426 AAAAATAGAGCCCGGTTACTGCCCAGCGCGATTTCGGCTGCTGTGGTTTCTCTTCAATCG 61485 Query 38934 AAATAGC-TTGACGATTACTCCCAAATTCAACCACACCGAATCGTTCAGGATCTTTCACC 38992 | || || |||| | ||| |||| || ||||| ||||| ||||| || || | ||| Sbjct 61486 AGATCGCCTTGAAG-TTATCGTCAAACTCCACCACGCCGAAACGTTCCGGGTCCATGACC 61544 Query 38993 AAATACCCGAAAATACAAGCTCCGCCCCAAACATCTAC--CATCTCACTGGCGTTAATCA 39050 ||| ||||| | | | |||| | | | | | || || | ||| Sbjct 61545 TGATAGCCGAACACC---GTTGCGCCACGATTCTGTTCAACAACT---TTGCGG------ 61592 Query 39051 GTAGTTTA---CCAAAGCTTTGTCCGAAGAATAGGTTGTCACCTAAAATAAGAGCAACAG 39107 || || | |||| || || || | ||||| ||||| | || || ||| || Sbjct 61593 --AGCTTGGGGCTGAAGCCCTGGCCAAAATAGAGGTTATCACCCAGAACCAG-GCAGCAA 61649 Query 39108 AG-TCTTCTCCGATAAAATCTTTACCTATGATGAAAGCTTCCGCAAGACC-TCGTGGCTC 39165 || || |||||||| || || ||||| || || | ||| || || ||| | || Sbjct 61650 TTATCCTCGCCGATAAAGGATTCGCCGATGATAAAGGCCTGCGCCAGCCCATCGGGACTT 61709 Query 39166 GGATTGGATTGCGTAAGTGAGTTTTATCCCAAACATAGACCCATCTCCGAGAAGATACTC 39225 || | | | || || |||| ||||||||| | ||||| || || || || Sbjct 61710 GGCT-GCACCGCATAGCTGAGGCGTATCCCAAATTCACTGCCATCGCCCAGCAGCCGTTC 61768 Query 39226 AAAGTCTTCCTGATCACCTGGTGTGGTGATGATTAAAATATCCTTAATGTCAGCCAACAT 39285 ||| | || |||| | || ||||| || | | || || ||| | |||| ||| Sbjct 61769 AAACTGCGCCCGATCTTCCGGCGTGGTAATTAACAGGATGTCGCGAATACCCGCCAGCAT 61828 Query 39286 CAATACCGATAAAGGGTAGTAGATCATGGGTTTGTCATACACAGGGAGCAATTGCTTGCT 39345 || || || | || ||||||||||| |||||||| || || || || | |||||| | Sbjct 61829 CAGCACGGAGAGCGGATAGTAGATCATCGGTTTGTCGTAAACCGGCAGAAGTTGCTT--T 61886 Query 39346 CACACTG--CGTGTTACCGGATGAAGGCGGGTTCCACTTCCTCCCGCCAAAATAATACCT 39403 | |||| || |||| ||| || | || || || |||||||| ||||| || ||| Sbjct 61887 GATACTGCACGGGTTATCGGGTGTAACCGCGTGCCCGACCCTCCCGCTAAAATGATGCCT 61946 Query 39404 TTCAT 39408 ||||| Sbjct 61947 TTCAT 61951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472592772712280