Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_020083.1 Length=157834 Score E Sequences producing significant alignments: (Bits) Value seq1 183 3e-41 seq4 111 2e-19 >seq1 Length=970878 Score = 183 bits (202), Expect = 3e-41 Identities = 284/404 (70%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 106057 CTGCCGACCCCGATCATGGCTGGCGTCCGTACCCGTACCCGTCAGTTCAGCTCCTGTGTG 106116 |||||||| || |||||| ||||||| || |||| || ||||||||||||||||||||| Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 106117 CTGATCAAAGTCGGCGACACGCTGGACTCTATCAAGGCCGCAGGCTCTGCTATCGTTGAC 106176 |||||| | |||||||| |||||||| ||||| ||| | | || || || | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 106177 TATGTCAGCAAGCGCGCAGGCATCGGTCTGGACGTGGGGGAGATTCGTGCCCTCGGTGCT 106236 |||||| |||| || ||||||||| | ||| || || ||||| || || Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 106237 CCTATCCGTGGCGGTGAGATGGAGCATACCGGAACTATCCCATTCATCAAGAAGTTC--G 106294 || || || |||||||| | |||||||| |||||| ||| |||| | ||| | Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAG 158434 Query 106295 TCGGTGACCTGAAGAGCTGCTCTCAGGGTGGGGTTCGCGGCGGCTCTATGACTGCCTACT 106354 | | | ||||| ||| |||||||| || ||||| |||||| | || | || Sbjct 158433 ACCGCG--GTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCT 158376 Query 106355 ATCCGATGTGGCACCTGCAGTTCCCAGCCATGATTGTTCTGAAGAATAACCGTGGCACTG 106414 | ||||||||||| ||| | || | | || | || |||||||| |||||||| || Sbjct 158375 ACCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTG 158316 Query 106415 AGAACAACCGCGAACGCCGCACTGATTATGGTGTGCAGATCAAC 106458 | |||||||| || | || || |||||||| ||| ||||| Sbjct 158315 AAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAAC 158272 >seq4 Length=447486 Score = 111 bits (122), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19326 ATTTGGTAGTCCCTGTTGGCTTTGAACCAACGACCAAGCGATTATGAGTCGCATGCTCTA 19385 ||||||| | ||||| ||| ||||||||| |||||||||||||||||||||| ||||||| Sbjct 299304 ATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 299245 Query 19386 ACCACTGAGCTAAGGG 19401 |||||||||||||||| Sbjct 299244 ACCACTGAGCTAAGGG 299229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504900600400560