Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=970878 Score = 118 bits (130), Expect = 1e-21 Identities = 299/455 (66%), Gaps = 0/455 (0%) Strand=Plus/Plus Query 133793 TTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTC 133852 |||| || | ||| || || | ||||| | |||||| | || ||||| ||||||| Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 133853 TTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 133912 || | |||| |||| |||| | || ||||||||||| || || | || || ||||| Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGCGTGGCTGCG 158392 Query 133913 CCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 133972 || ||||| || ||||| |||||||| || || || || ||||| ||||| || |||| Sbjct 158393 CCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAAC 158452 Query 133973 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 134032 || || ||| ||||| |||| || | ||| ||| || || || Sbjct 158453 GGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGGATA 158512 Query 134033 ATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTT 134092 |||||||||||| ||||| || || |||| || ||| || | ||| | | Sbjct 158513 CGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTGGAG 158572 Query 134093 GCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGA 134152 | || || || || | ||| ||||| || || | ||||| || || |||||| Sbjct 158573 GTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTGA 158632 Query 134153 CGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGGCGAGTAGAT 134212 || || || || || | || | ||| || || || |||| || || | || || Sbjct 158633 CGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCAGGGAGATTTTAAACGTCGAG 158692 Query 134213 ACAGCATCATAAAAACGAATAATATGAGCCAGACG 134247 | |||||||| ||||| | || | | ||| ||| Sbjct 158693 ATCGCATCATAGAAACGCTTGATGTAATCCATACG 158727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512538392288440