Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq3 80.6 7e-11 >seq3 Length=630259 Score = 80.6 bits (88), Expect = 7e-11 Identities = 194/289 (67%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 25793 TCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCACTTGCGCGTGCGCAACTTGCCT 25852 || || ||||| | || || || ||| | |||||| || || ||||||| || |||| Sbjct 51111 TCGGTGGTGTAACGCTCCTGGCCACCCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCT 51052 Query 25853 TCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCCAACTTCCCG 25912 || || || | || || ||||| ||| || || || || || |||| || || Sbjct 51051 TCGATATAGACCTGCGATCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAGTTTGCCA 50992 Query 25913 TATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGCTTGTCTTTG 25972 | | ||| |||||||||||||| || | ||| | || ||||||||||| Sbjct 50991 AACAGCACCACACGGTGCCACTCAGTGATCTCTTTGTTTTCACCGGTCTGCTTGTC--GC 50934 Query 25973 TACTGCTCACTG--GTGGCAATGCTTAA-ATTTGCCACGGCGGTACCGTTAGGCATATAC 26029 | ||| | | || || | || ||| || || || ||| ||| || |||||||| Sbjct 50933 GCCAGCTTTCCGACGTAGCCA-GCGTAATGTTGGCAACAGCGCCACCATTTGGCATATAA 50875 Query 26030 CTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTAA 26078 | |||||||| ||||| || | || ||||||| || || ||||||| Sbjct 50874 CGTACTTCCGGATCCTGACCCAGATTCCCGACAAGAATCACTTTGTTAA 50826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123651447301832