Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 >seq1 Length=970878 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 47944 GTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATA 48003 || |||||||| || ||||| | ||||| ||| |||||||| ||||| ||||| Sbjct 320544 GTGATCTTACGGGTCACAAACTCCTGTCCACGCAGTGGGGATTCATGGTTAAACAGAATT 320485 Query 48004 CCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAG 48063 || || | || | || ||| ||||| ||||| || ||||||| |||| Sbjct 320484 CCGCTTGATGCGAAGATGTTGTAGCTCTCACGGTAGTTAATTGTCATCCAGTGGGCATAC 320425 Query 48064 AGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTC 48123 | || ||||||||||| || ||| |||||||||||||| |||| |||| ||| | Sbjct 320424 AACTTAGCAACACCATACGGGCTACGCGGATAGAAAGGTGTATCCTCTTTCTGCGGAATA 320365 Query 48124 TCTTGCACCTTACCATAAAGTTCACTG--GTGGATGCTTGATAGA 48166 | ||||| ||||| ||| || ||| || || || ||||||| Sbjct 320364 GCCTGCACTTTACC--AAACATCTCTGAAGTAGACGCCTGATAGA 320322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665441418327080