Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq1 461 5e-125 seq3 87.8 1e-12 >seq1 Length=970878 Score = 461 bits (510), Expect = 5e-125 Identities = 1107/1668 (66%), Gaps = 30/1668 (2%) Strand=Plus/Minus Query 9206 TACATCAAAGAATTCTATGATGC-AGCGAGCACATTTGAAATCTCCCTCCCGACACCAAT 9264 |||||||| ||||||||||| | | | || ||| |||||||||| ||||| ||||| Sbjct 158718 TACATCAAGCGTTTCTATGATGCGATCTCG-ACGTTTAAAATCTCCCTGCCGACGCCAAT 158660 Query 9265 CATGTCTGGTGTTCGTACACCGACCCGCCAATTCAGCTCATGCGTAAAAATCGAAAGCGG 9324 ||||||||| || || || || || || || |||||||| || || ||||| |||| Sbjct 158659 CATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGCTGATCGAGTGCGG 158600 Query 9325 TGATAGCCTAAAATCAATCAATGCAACATCAGGCGCAATCGTGAGTTACGTTTCACAGCG 9384 || ||||| | || ||||| || || || ||||||| |||| || || || ||||| Sbjct 158599 CGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAATATGTCTCTCAGCG 158540 Query 9385 TGCAGGTATTGGCATTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTCGTGGTGG 9444 ||| || || || || ||||| ||||||||||| || | || |||||| || || Sbjct 158539 TGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGCCCGATTCGCGGCGG 158480 Query 9445 TGAAGCGGTACATACTGGTTGTATCCCATTCTACAAACACTTCCAAACAGCAGTGAAATG 9504 ||||||| | ||||| || |||||||| |||||||| || ||||| || || ||||| | Sbjct 158479 TGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAGACCGCGGTGAAGTC 158420 Query 9505 TTGTAGCCAAGGCGGTGTTCGTGGCGGCGCGGCAACGGTATTCTACCCAATGTGGCACCT 9564 ||| || ||||| |||||||||||||| || ||| | |||||||| |||||||| || Sbjct 158419 CTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCTACCCGATGTGGCATCT 158360 Query 9565 AGAGTACAAATCACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAACCGTGTACG 9624 || | || || | || || ||||||||||||||| | |||| ||||| || || Sbjct 158359 GGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAAGGCAACCGCGTGCG 158300 Query 9625 TCATATGGACTACGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCTGTCTGGTCA 9684 ||| |||||||| |||||||| | || ||||||||| |||| |||||| || | Sbjct 158299 TCACATGGACTATGGTGTACAGCTCAACAAGCTGATGTATCAGCGCCTGCTGAAAGGCGA 158240 Query 9685 GAACATCACTTTATTCTCACCTCATAGTGTACCGGGTCTATACGATGCATACTTCGAAGA 9744 | ||||| | ||| || | || || || || || || |||| ||||| | Sbjct 158239 AGATATCACCCTGTTCAGCCCGTCTGACGTGCCTGGCCTGTATGACGCATTCTTCGCCAA 158180 Query 9745 CCAAGATAAGTTCGAGCGACTGTACACCAA-----AGCGGAATCTGATC--CATCAATC- 9796 || ||| |||| ||||| || || ||||| ||| | ||| || | | ||| | Sbjct 158179 TCAGGATGAGTTTGAGCGCCTCTATACCAAATATGAGCAGGATCAGAGCATCCGCAAGCA 158120 Query 9797 ----GAAAAAG-ACACAATCTCTGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTG 9851 | |||| | |||||| || || | | | ||||| || || | Sbjct 158119 GCGTGTTAAAGCGGTCGATCTCTTCT-------CACTGA------TGATGCAGGAACGCG 158073 Query 9852 CTTCTACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATTAACGGTCCTTTCG 9911 | ||||| || || |||||||||||| |||| |||||||| |||| || | || || | Sbjct 158072 CCTCTACCGGCCGTATCTACATTCAGAACGTCGATCACTGCAACACCCACAGCCCGTTTG 158013 Query 9912 ATGAGCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATCGCACTACCAACCA 9971 | | || |||| || || ||||| || ||||| || |||||||||| || || || | Sbjct 158012 ACCCGAGCATTGCGCCGGTTCGCCAGTCTAACCTCTGCCTGGAAATCGCCCTGCCGACGA 157953 Query 9972 AACCGTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGTACTCTATCTGCAT 10031 ||||| || | | || | || | ||||| |||| || ||||| || ||||| | Sbjct 157952 AACCGCTGGAAGATGTTAACGACGAAAACGGTGAGATTGCCCTGTGTACGCTCTCTGCGT 157893 Query 10032 TCAACTTGGGTAAGATTGAATCGGTTGGTGATTTTGAGCGTCTGTCTCGTATCGTTGTGC 10091 ||||| | || || ||| | | ||| | || ||| || | | || | Sbjct 157892 TCAACCTCGGCGCCATCGAAAGCCTCGACGATCTGGAAGAGCTGGCTACCCTGGCCGTAC 157833 Query 10092 GTGCATTGGATAATCTGTTAGACTACCAAAACTACCCATTACCTGCCGCAGAACGTTCGA 10151 |||| | ||| ||| | ||||| || ||||||| | || || || | ||| Sbjct 157832 GTGCGCTTGATGCGCTGCTCGACTATCAGGACTACCCGATCCCGGCTGCCCAGCGTGGCG 157773 Query 10152 CAATGCGCAGACGTAGCCTTGGTGTAGGTATTATCAATTACGCCCACTGGGTGGCTAAGA 10211 | ||| | | |||| || ||| | || | ||||| |||||| ||| |||| ||| Sbjct 157772 CGATGGGTCGTCGTACTCTGGGTATCGGCGTCATCAACTACGCCTACTATCTGGCGAAGC 157713 Query 10212 ATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGAGCTGATTGAAGCTA 10271 |||| | ||| || || ||||| || | |||||| || ||||||| | Sbjct 157712 ATGGTGTGCGCTACTCCGATGGCAGCGCCAATGGCCTGACGCACAAGACCTTTGAAGCGA 157653 Query 10272 TGCAGTTCTACTTGCTACAAGCATCAATGGAACTGGCTAAAGAGAAGGGTATGTGTTCTG 10331 | |||| ||| |||| |||| |||| || ||||| |||||| | ||| || | Sbjct 157652 TTCAGTATTACCTGCTGAAAGCCTCAAATGAGCTGGCGAAAGAGCAAGGTGCCTGCCCGT 157593 Query 10332 GATTCGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGATCGTTATAAGTCTGATG 10391 | ||| | || || | ||||| | || || |||| | || || ||| ||| Sbjct 157592 GGTTCAATGAAACCACCTATGCGCAGGGCATTCTGCCTATCGACACCTACAAGAAAGATC 157533 Query 10392 TCGACAACACCCACACAGCAGAACTACAGATGAATTGGAATTGGTTGCGTAATGAGATTG 10451 | ||| | | || | | || || | | ||| | | ||||| | |||||| Sbjct 157532 TGGACGCGATCAGCAACGAACCGCTGCATCTCGACTGGGAAAGCCTGCGTGAAGAGATTA 157473 Query 10452 TCCATAATGGCCTACGTAACTCTACTCTATCTGCATTCATGCCTTCGGAAACATCTTCTC 10511 | ||||| || ||||| || || ||||| | ||||| || ||||| || || | Sbjct 157472 AAACGCACGGCCTGCGCAACTCGACCCTGTCTGCGCTGATGCCGTCTGAAACCTCGTCGC 157413 Query 10512 AGGTATCTAACGCAACAAACGGCATCGAACCACCTCGTGGCTACAT-GTCAGTTAAGCAG 10570 || | || || || || ||||| || || || || || || |||| || |||| | Sbjct 157412 AGATCTCCAATGCCACCAACGGTATTGAGCCTCCGCGCGGTCACATCAGCATCAAAGC-G 157354 Query 10571 TCGAAGGATGGCATCTTAAAACAAATCGTACCGGGTTATGATAAATACAAAGACCAATAC 10630 || || ||||||||| | || |||| |||| ||||| ||||| || ||| Sbjct 157353 TCAAAAGATGGCATCCTGCGTCAGGTCGTGCCGGAGTATGAGCGTCTGAAAGATCAGTAC 157294 Query 10631 GAGTTACTATGGAATATCAAAGACAACACTGGTTACTTGGAATTGGTTGCCATCATGCAG 10690 || | || ||| | || ||||| || ||| || || |||| | | |||||| Sbjct 157293 GAACTGCTGTGGGAAATGCCGAACAACGACGGCTACCTGCAACTGGTGGGTCTGATGCAG 157234 Query 10691 AAGTTTGTGGATCAGGCTATTTCAGCAAACACTAACTACGACCCAGAAAACTACCCAGAA 10750 || || | || ||||| ||||| | ||||| |||||||| || || | | | Sbjct 157233 AAATTCATCGACCAGGCGATTTCGTCCAACACCAACTACGATCCGTCGCGCTTCACCAAC 157174 Query 10751 AGTAAGGTTCCAATCAAAAAGTTATTGCAAGATTTGGTGACATGTTATAGACTCGGCATC 10810 |||| || || || ||| || | || ||||| || |||| |||| ||||| | Sbjct 157173 GGTAAAGTGCCGATGAAACAGCTGCTGAAAGATCTGCTGACGGCGTATAAGTTCGGCGTG 157114 Query 10811 AAGACACTGTACTACCACAACACACGAGATGGTGCTAGTGATGAACAG 10858 || || || ||||| || ||||| || || |||||| |||| |||| Sbjct 157113 AAAACGCTCTACTATCAAAACACCCGTGACGGTGCTGAAGATGCACAG 157066 Score = 410 bits (454), Expect = 8e-110 Identities = 709/1030 (69%), Gaps = 39/1030 (4%) Strand=Plus/Minus Query 10940 AAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCCGTTAC 10999 ||||| || || ||||| ||||||||||| ||||| || || || ||||| | || | | Sbjct 156906 AAAAATGATCAGCTGAAAGAGCCGATGTTTTTCGGTCAGTCCGTAAACGTGGCGCGCTTC 156847 Query 11000 GACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCTTCTGG 11059 ||||| || ||| |||| | ||||| || || | | ||||| || || ||||||||| Sbjct 156846 GACCAGCAAAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGG 156787 Query 11060 CGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGACTACAGTAAAATGACTGATGCG 11119 ||||| ||||| || || || |||| || || ||||| ||| || | ||| Sbjct 156786 CGTCCGGAAGAGGTCGACGTTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGATCAT 156727 Query 11120 GAGAAACACATCTTCATTAGTAACCTGAAGTACCAAACATTACTCGACTCGATCCAAGGC 11179 || ||||| ||||| || || ||||||||||| || || | || || ||||| || ||| Sbjct 156726 GAAAAACATATCTTTATCAGCAACCTGAAGTATCAGACGCTGCTGGATTCGATTCAGGGC 156667 Query 11180 CGTAGCCCGAATATGGCGTTCCTGCCTATTGTGTCACTACCAGAAGTCGAAACTTGGGTA 11239 || |||||||| | ||| | ||||| | | || | || ||| | ||||| ||| | Sbjct 156666 CGCAGCCCGAACGTCGCGCTGCTGCCGCTGATCTCGATTCCTGAACTGGAAACCTGGATT 156607 Query 11240 GAAACGTGGAGCTTCAGCGAAACCATCCACTCTCGTTCATACACACACATCATTCGCAAT 11299 ||||| ||| ||| || || || ||||| ||||| ||||| |||||||| || || Sbjct 156606 GAAACCTGGGCGTTCTCAGAGACGATTCACTCCCGTTCTTACACCCACATCATCCGTAAC 156547 Query 11300 ATTGTCAATGACCCTAGTATTGTGTTCGATGATGTTGTTGAGAATAAGCACATCCTAGAG 11359 ||||| || || || | || || || ||| | ||| ||| |||| || || | | Sbjct 156546 ATTGTTAACGATCCGGCGGTAGTTTTTGACGATATCGTTACCAATGAGCAGATTCTGGCG 156487 Query 11360 CGAGCTAAAGATATTGCTCGTTACTACGACGATCTCAT------------CT--TGGCAT 11405 || ||| | ||||| | || || ||||||||||| || || |||||| Sbjct 156486 CGTGCTCAGGATATCTCACGCTATTACGACGATCTGATTGAGATGACCAACTACTGGCAT 156427 Query 11406 -------GCAAAGA---GCATGAGCTAAACGGCAAACA---------CACAATGCGCGAC 11446 | ||| |||| || | |||||||||| || |||||| | Sbjct 156426 CAGCTGGGTGAAGGCACGCATCAGGTCAACGGCAAACCGGTTGTCGTCAGCCTGCGCGCC 156367 Query 11447 CTAAAGAAAAAGTTGTACTTGTGCATGATGGCTGTTAATGTATTAGAAGCAGTTCGTTTC 11506 || ||||| || | || | ||| ||||| || |||| | ||||| | |||||| Sbjct 156366 CTGAAGAAGCAGCTCTATATCTGCCTGATGAGCGTCAATGCGCTGGAAGCGATCCGTTTC 156307 Query 11507 TACGTTAGTTTCGCTTGTTCATTTGCATTCGCTGAACGCGAGATTATGGAAGGTAATGCT 11566 || || || ||||| ||||| || || |||||||| || ||| | |||||||| ||||| Sbjct 156306 TATGTCAGCTTCGCCTGTTCCTTCGCGTTCGCTGAGCGTGAGCTGATGGAAGGCAATGCC 156247 Query 11567 AAAATCATCAAGCTTATTGCTCGTGATGAAGCACTACACCAAAGCGGTACACAGCACATG 11626 |||||||||||||| ||||| || |||||||| || |||| | ||| || ||||||||| Sbjct 156246 AAAATCATCAAGCTGATTGCCCGCGATGAAGCGCTGCACCTGACCGGCACCCAGCACATG 156187 Query 11627 CTGAAGATGTGGAACAACGGCACCGATGATATGGAAATGGCTTCTATCGCACATGAGTGT 11686 ||||| || | || ||| || ||| ||| ||| || || ||||| Sbjct 156186 CTGAACCTGCTGCGCAGCGGTGAAGACGATCCGGAGATGAAAGAGATTGCGGCAGAGTGC 156127 Query 11687 CGCGAAGAGTCAATCGAAATATTCAAGATGGCCGAAGAACAAGAGAAAGACTGGGCAAAC 11746 || ||||||| |||| | || |||| || | | || |||||||| |||||| | Sbjct 156126 CGTGAAGAGTGCTTCGAGCTGTTTAAGAAAGCAGCACTGCAGGAGAAAGAGTGGGCAGAA 156067 Query 11747 TATCTATTCAAAGATGGTGGTATGATCGGACTAAACAAAGATATTCTATGTGAATATGTT 11806 ||||| |||| | || |||||||| || |||||||||||||| || | || || Sbjct 156066 TATCTGTTCAGCGGCGGCTCAATGATCGGCCTGAACAAAGATATTCTCTGCCAGTACATT 156007 Query 11807 GAGTACATCACAAGCCACCGAATGAAGTATGTCGGGCTACCT---CCGCTACACCCGGAA 11863 ||||||||||| | ||| ||| || |||||| || | ||| | || || Sbjct 156006 GAGTACATCACCAATATCCGTATGCAGGCTGTCGGCCTTGATTTGCCGTTCCAGACG--C 155949 Query 11864 GCAACTAACCCAATCCCATGGATCAACAACTGGTTGGTTAGTGATAATGTTCAAGTTGCT 11923 || | ||||||||||||||||| ||| |||| |||| ||| || ||||| ||||| Sbjct 155948 GC-TCAAACCCAATCCCATGGATTAACTCCTGGCTGGTCTCTGACAACGTTCAGGTTGCG 155890 Query 11924 CCACAGGAAG 11933 || ||||||| Sbjct 155889 CCGCAGGAAG 155880 >seq3 Length=630259 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 6202 TCGCCGTTCTACCCGATGTTCAACTGCTGTTTGGTCGATCTTAAAGGTATGTTGGCGAAT 6261 || || |||| |||||||||||||||| || ||||||| ||||| ||| || | || Sbjct 229808 TCCCCTTTCTTCCCGATGTTCAACTGCATGCTGATCGATCTGAAAGGCATGCTGACCAAC 229749 Query 6262 GGGTTTATGATGGGTAACGCAGACATCGAAACCCCTAAGTCAATCTCAACTGCGTGTGCT 6321 || || | ||||| || || || ||||| | ||||| || ||| | || || || Sbjct 229748 GGTTTCAAAATGGGCAATGCTGAGATCGAGCCGCCTAAATCGATCGCCACCGCCACCGCC 229689 Query 6322 ATCACTGCACAAATTATCGCTCAGGTTGCGTGCCACCAATACGGTGGGGTTAGCCTCAAT 6381 | || || || || ||||| ||||| || |||| ||||| || | | | || Sbjct 229688 GTGACGGCGCAGATCATCGCGCAGGTCGCCAGCCATATTTACGGCGGCACCACCATTAAC 229629 Query 6382 CGTCTTGATGAGGTGTTGGCACC 6404 ||| ||||||| ||| |||| || Sbjct 229628 CGTATTGATGAAGTGCTGGCCCC 229606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342946177701011