Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq13 457 5e-124 >seq13 Length=199142 Score = 457 bits (506), Expect = 5e-124 Identities = 674/945 (71%), Gaps = 16/945 (2%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || || |||||||||||| | || ||||| |||||||| || ||||| || | ||| Sbjct 180457 GCAATTAACTGGAACCGCATTCAGGATGACAAAGATCTTGAAGTGTGGAATCGTCTCACC 180516 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 | ||||||||||||||| ||||| | || |||||||||| | || | |||| ||| Sbjct 180517 AGCAACTTCTGGCTGCCGGAGAAAGTGCCGCTCTCCAACGATCTGCCCGGCTGGCAGACG 180576 Query 59386 CTGACGGAGGAAGAGCA--AGTC-CTCACGATGCGGGTCTTCACCGGCCTGACGATGCTC 59442 ||| || || |||| || || || || ||||| ||||||||||||||| | || Sbjct 180577 CTG---GATAAACAGCAGCAGCAGCTGACCATCCGGGTGTTCACCGGCCTGACGCTACTT 180633 Query 59443 GACACGATCCAGGGCACCGTG---GGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCG 59499 ||||| |||||| | |||| || || | | ||||| || || || || ||| Sbjct 180634 GACACCATCCAG---AACGTGATCGGCGCGCCGGGGCTGATGGAAGATGCCATTACCCCG 180690 Query 59500 CACGAGGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTAC 59559 || || ||||||||| |||| ||| || ||||| ||||||| || |||| Sbjct 180691 CATGAAGAGGCGGTGCTGTCGAATATCAGCTTTATGGAAGCGGTGCATGCCCGCTCCTAC 180750 Query 59560 AGCAACATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCG 59619 || |||||||| || ||||| || |||| | || || || | | ||| Sbjct 180751 AGTTCGATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCCGCTTATCAGTGGAGC 180810 Query 59620 GAGGAGAATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGAC 59679 || |||||| || ||||| |||||| | ||| ||||||| ||||||||| || Sbjct 180811 GAAGAGAATGCGCCGCTGCAGAACAAGGCACGCATCATCCTGGAACACTACCAGGCCGAT 180870 Query 59680 GATCCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGC 59739 |||||||||||| |||| | ||| || |||||| ||| ||||||| || ||| Sbjct 180871 GATCCGCTGAAGAAGAAGATCGCCAGCGTTTTCCTGGAGTCGTTTTTGTTCTATTCCGGC 180930 Query 59740 TTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATC 59799 |||| ||||||||||||||||| || || || |||||||| ||||| || ||| |||| Sbjct 180931 TTCTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGCTGACCAACACCGCTGACCTGATT 180990 Query 59800 CGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGC 59859 || || || ||||| || |||||||||||||| ||||||||||| ||||| | |||| Sbjct 180991 CGCCTGATTATTCGCGATGAGGCGGTGCACGGTTACTACATCGGTTACAAATATCAGCAG 181050 Query 59860 GGCCTGG-AGACTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCT 59918 | |||| | | | | |||| |||||||| |||||| || | | | | || | ||| Sbjct 181051 GCGCTGGCTGCCGCTG-ACGATCTGCGCCGCGAAGAGCTGCAGCAGTTCGCCTATGATCT 181109 Query 59919 GCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGG 59978 ||| || | | |||| || ||||| | | || || ||| || || | || || || Sbjct 181110 GCTGCTGGCGCTGTATGAGAACGAAGTGGCTTATACCGAGGCGCTCTATGCCGATGTTGG 181169 Query 59979 ACTGACT-GAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATC 60037 ||| | ||||| || || | ||||||| ||||||||||||||| ||| ||||||||| Sbjct 181170 -CTGGGTAGAGGAGGTGAAAACCTTCCTGCACTACAACGCCAACAAAGCGTTGATGAATC 181228 Query 60038 TCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGG 60097 | ||||| ||||||||||||||| || || | ||||||| |||| || || ||| Sbjct 181229 TGGGCTATGAGGCGCTGTTCCCGGCGGAGCTGACAGCGGTGAATCCGGCCATTCTGTCGG 181288 Query 60098 CACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATG 60157 | ||||| || || ||||| ||||||||||||||||| || || ||| | | |||| Sbjct 181289 CTCTGTCGCCCAACGCCGACGAAAACCACGACTTCTTCTCCGGTTCAGGCTCCTCCTATG 181348 Query 60158 TGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 |||| || || || | | || ||||| ||||| ||| | |||| Sbjct 181349 TGATGGGAAAAGCGGTCGAAACCGAAGATGAGGACTGGAATTTCT 181393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258911101193844