Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq4 109 3e-19 >seq4 Length=447486 Score = 109 bits (120), Expect = 3e-19 Identities = 428/659 (65%), Gaps = 23/659 (3%) Strand=Plus/Minus Query 66831 GCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGAC 66890 |||| ||||| || || || | || || || | ||||||||| ||||| || ||| Sbjct 25767 GCCTTTATCGATGCAGAACATGCGCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGAC 25708 Query 66891 CTCGACAACCTCGTGGTGGT-TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66949 | || ||||| | || | |||||| |||||||| |||||||| ||||| ||| ||| Sbjct 25707 ATTGATAACCTGCTC-TGCTCTCAGCCTGACACTGGTGAGCAGGCGCTGGAAATCTGTGA 25649 Query 66950 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 67009 || | ||||| | | | | || |||| ||||| || ||||| ||| Sbjct 25648 TGCGCTGGCGCGCTCTGGTGCCGTTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGAC 25589 Query 67010 GCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCT 67069 ||| || || ||||||| || ||||| ||| ||| | ||||| || || | Sbjct 25588 GCCTAAAGCGGAAATCGAAGGTGAAATCGGTGACTCACACATGGGCCTCGCGGCACGTAT 25529 Query 67070 CATGTCACAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCA--CCAACACGCTGACG 67127 ||| ||||| ||||| || || |||| | | || |||| |||| || ||| | Sbjct 25528 GATGAGCCAGGCGATGCGTAAACTGGCCGGTAAC--CTGAAGCAGTCCAATACCCTGCTG 25471 Query 67128 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGA 67185 | | |||||||| | || ||| || || | || | || |||| || | Sbjct 25470 ATTTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTTGGTAA--CCCG---GAAA 25416 Query 67186 CCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCA 67245 ||||||| || || || || ||| |||||||||||| || || | ||| |||| || | Sbjct 25415 CCACCACTGGTGGTAACGCGCTGAAGTTCTACGCCTCTGTTCGTCTTGATATCCGCCGTA 25356 Query 67246 TCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCA 67305 ||| | || || |||||| | | ||||||| ||||| || || || || | Sbjct 25355 TCGGTGCAATCAAAGAGGGCGATAACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGA 25296 Query 67306 AGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCA 67365 | ||||| | ||| |||| | | || |||||| || ||||||| || || | Sbjct 25295 AAAACAAAATCGCCGCGCCATTCAAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTA 25236 Query 67366 TC-TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTG-GTGAAGAAGTC 67423 || | | ||| || || ||||||||| |||| ||| ||| |||| ||| | Sbjct 25235 TCAATACCTTTGGT-GAGCTGGTCGACCTGGGCGTGAAGCACAAGCTGATTGAAAAAG-C 25178 Query 67424 GGGCGCCTGGTTCAAGTAC---GGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCG 67479 ||| || |||| || ||| || ||||||| | | |||||| || | || |||| Sbjct 25177 GGGTGCATGGTACAGCTACAATGGCGACAAGA---TTGGTCAGGGTAAATCGAATGCCG 25122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244589012991960