Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq3 154 5e-33 >seq3 Length=630259 Score = 154 bits (170), Expect = 5e-33 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 |||||||| ||||| ||||||||| || ||||| || |||||||||||||| ||||| | Sbjct 614700 GAAGTCGACGTCGAAATCGGGCATCGAGACGCGTTCCGGGTTCAGGAAGCGTTCGAACAG 614641 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 || | |||||||| |||| |||||||| || | ||||| ||||| ||||| Sbjct 614640 CAGGTCAAATTCCAGCGGATCGATATCGGTGATTTTCAGCGCATAGGCCACCAGTGAACC 614581 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 ||| | || || ||||| || |||||| || ||||| ||||||| ||| ||||||| Sbjct 614580 GGCACCGGAACCACGCCCCGGCCCGACCGGCACGCCGTTGTCCTTCGACCACTGGATGAA 614521 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGA 40482 ||| |||| |||||||| ||||| ||||||||| | || | || || Sbjct 614520 CTCCATTACGATCAGGAAGTAGCCGGGGAAACCCATCTGGTTAATAACGTTGA 614468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163312447439142