Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq1 260 2e-64 seq4 217 2e-51 >seq1 Length=970878 Score = 260 bits (288), Expect = 2e-64 Identities = 389/550 (71%), Gaps = 4/550 (1%) Strand=Plus/Plus Query 87543 AAAAATCTTATCTTCGCCACCGGCGAAGCGGGGTGTGGGAAAACGTTTATTTCCGCCGCA 87602 ||| | || |||||||| ||||| ||||| ||||| || ||||| | || |||||| Sbjct 538153 AAACAGCTGATCTTCGCAACCGGTGAAGCCGGGTGCGGTAAAACCTGGATCAGTGCCGCA 538212 Query 87603 TACGCTTGCGAACGTTTGCTGGCCAAAGATATCGAACGTATCATCGTCACTCGTCCGGTG 87662 | || || || | || |||||||| | || ||||| || || ||||| Sbjct 538213 AAAGCGGCTGAGGCCCTGATTAATAAGGATATCGACAGGATTATCGTTACGCGCCCGGTA 538272 Query 87663 CTCTCCGCAGATGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCG 87722 || |||||||| ||| | || ||||| |||||||| || | || |||||||| || Sbjct 538273 CTGCAGGCAGATGAGGATCTGGGATTCCTTCCCGGCGATATTTCTGAGAAATTCGCGCCT 538332 Query 87723 TACTTCCGCCCTGTTTATGACGTTCTTCAAAAACGTCTCGGT--AGCCGCTACCTGCAAT 87780 || |||||||| ||||||||| |||| |||||||| || | || || |||||| Sbjct 538333 TATTTCCGCCCGGTTTATGACATTCTGGTTAAACGTCTTGGCGCATCCTTTA--TGCAAT 538390 Query 87781 ACTGCCTTAAGCCCGGTATCGACAAAGTGGAGATTGCTCCTTTTGCGTACATGCGTGGCC 87840 | || || || | || | ||| || |||||||| || || || || |||||||| | Sbjct 538391 ATTGTCTGCGTCCGGAAATTGCCAAGGTAGAGATTGCACCGTTCGCCTATATGCGTGGTC 538450 Query 87841 GCAGTTTCGAAAATGCGGTTGTCATTTTAGATGAAGCTCAGAACACTACTGCTCAGCAGA 87900 ||| |||||||||||| || || ||| | || || || |||||| || || ||||| Sbjct 538451 GCACTTTCGAAAATGCTGTGGTAATTCTGGACGAGGCGCAGAACGTCACCGCCGCGCAGA 538510 Query 87901 TGAAGCTCTTCCTGACACGTATCGGGGAGAACTGTATCGTTATCGTAAACGGTGACGTCA 87960 |||| | |||||||| || | || || ||| | || || || ||||| || | | Sbjct 538511 TGAAAATGTTCCTGACCCGACTGGGCGAAAACGTCACGGTCATTGTTAACGGCGATATTA 538570 Query 87961 CACAGTGCGACTTGCCCAAAGGGGTGAAGTCTGGACTGGCCGACGCGTTGACCCGTTTCG 88020 | ||||||||||||||| |||||| || || || || |||||| || | ||||||| Sbjct 538571 CCCAGTGCGACTTGCCCGCTGGGGTGCCTTCCGGTCTCGCAGACGCGCTGGCGCGTTTCG 538630 Query 88021 AGGAAGACGATTTAGTTGGCGTCGTTCGTTTTACGAAAGACGACTGTGTGCGCTCTTTGC 88080 | || ||||| | |||||| | || || || ||||| || |||||||| ||| || Sbjct 538631 AAGAGGACGAGATGGTTGGCATTGTACGCTTCGGCAAAGAAGATTGTGTGCGTTCTGCGC 538690 Query 88081 TTTGTCAGCG 88090 | |||||||| Sbjct 538691 TGTGTCAGCG 538700 >seq4 Length=447486 Score = 217 bits (240), Expect = 2e-51 Identities = 228/297 (77%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 98895 ATGAAACAGTATCAAGATTTAATGGCTGAAGT-CTTTGCGAAAGGTACGCCGAAGAAAGA 98953 ||||||||||||| ||||||||| | || || |||| || ||||| || || Sbjct 112239 ATGAAACAGTATCTGGATTTAATGCAACATGTGCTGCACGAA-GGCACGCCAAAAGCTGA 112181 Query 98954 CCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAAGA 99013 ||||||||| || || |||||||| || || || ||||||||||||||||| |||| || Sbjct 112180 CCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAATCTGCAGGA 112121 Query 99014 AGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTGCT 99073 ||||| |||||||| || |||||| || || | ||||| ||||| ||||| ||||| Sbjct 112120 TGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGAGCTGCT 112061 Query 99074 GTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATTTG 99133 |||||| ||||||||||| ||||| ||| || || ||||| || || |||| || Sbjct 112060 GTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTCCATCTG 112001 Query 99134 GGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCG 99190 ||| || |||||||| | |||||||| ||||| ||||| || || || |||||||| Sbjct 112000 GGATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGGCAAACAGTGGCG 111944 Score = 194 bits (214), Expect = 2e-44 Identities = 238/320 (74%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 99591 TCTTGTCAGCTCTATCAGCG-TAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGC 99649 || || |||||||||||||| | |||| ||| | ||| |||| |||||||||||||||| Sbjct 111762 TCCTGCCAGCTCTATCAGCGCTCGTGC-GACATCTTCCTGGGCCTGCCGTTTAACATCGC 111704 Query 99650 GTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGGCGATT 99708 ||||| | ||| | || ||| | || |||||| |||| | || ||||||||| | Sbjct 111703 CAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGA-TCTGCAGGTGGGCGACT 111645 Query 99709 TCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGTACTC 99768 |||||||||||||||||||| || || || |||||||||||| ||||| || | Sbjct 111644 TCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGCGCGCCTGC 111585 Query 99769 AGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCCGGACTCTA 99828 || | || |||||| || |||| || |||||||||| || |||| || Sbjct 111584 AGCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCAAACCGGCGTCGC 111525 Query 99829 TCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCCGGCTATTA 99888 | || |||||| |||||||||||||||| || ||||||||||| || || || || || | Sbjct 111524 TGTTTGACTATCAGTTCGAAGATTTTGAGATTGAAGGCTACGATCCGCATCCCGCGATCA 111465 Query 99889 AAGCACCGGTGGCGATATGA 99908 |||| || || || || ||| Sbjct 111464 AAGCCCCTGTCGCCATCTGA 111445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716579746752760